Literature DB >> 19408315

Generic plasmid DNA production platform incorporating low metabolic burden seed-stock and fed-batch fermentation processes.

James A Williams1, Jeremy Luke, Sarah Langtry, Sheryl Anderson, Clague P Hodgson, Aaron E Carnes.   

Abstract

DNA vaccines have tremendous potential for rapid deployment in pandemic applications, wherein a new antigen is "plugged" into a validated vector, and rapidly produced in a validated, fermentation-purification process. For this application, it is essential that the vector and fermentation process function with a variety of different antigen genes. However, many antigen genes are unpredictably "toxic" or otherwise low yielding in standard fermentation processes. We report cell bank and fermentation process unit operation innovations that reduce plasmid-mediated metabolic burden, enabling successful production of previously known toxic influenza hemagglutinin antigen genes. These processes, combined with vector backbone modifications, doubled fermentation productivity compared to existing high copy vectors, such as pVAX1 and gWiz, resulting in high plasmid yields (up to 2,220 mg/L, 5% of total dry cell weight) even with previously identified toxic or poor producing inserts. Copyright 2009 Wiley Periodicals, Inc.

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Year:  2009        PMID: 19408315      PMCID: PMC2735187          DOI: 10.1002/bit.22347

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  39 in total

1.  Identification and characterization of IS1 transposition in plasmid amplification mutants of E. coli clones producing DNA vaccines.

Authors:  Kristala L Jones Prather; M Celina Edmonds; Jerrell W Herod
Journal:  Appl Microbiol Biotechnol       Date:  2006-08-29       Impact factor: 4.813

2.  Enhancement of ColE1-type replication promoted by the Gp alpha initiator protein of bacteriophage P4.

Authors:  R Díaz-Orejas; R Lurz; B Rückert
Journal:  FEMS Microbiol Lett       Date:  1997-10-01       Impact factor: 2.742

3.  Requirements for replication restart proteins during constitutive stable DNA replication in Escherichia coli K-12.

Authors:  Steven J Sandler
Journal:  Genetics       Date:  2005-02-16       Impact factor: 4.562

Review 4.  Replication fork stalling at natural impediments.

Authors:  Ekaterina V Mirkin; Sergei M Mirkin
Journal:  Microbiol Mol Biol Rev       Date:  2007-03       Impact factor: 11.056

5.  Isolation and characterization of a priB mutant of Escherichia coli influencing plasmid copy number of delta rop ColE1-type plasmids.

Authors:  H Bergès; J Oreglia; E Joseph-Liauzun; O Fayet
Journal:  J Bacteriol       Date:  1997-02       Impact factor: 3.490

6.  Stable high-copy-number bacteriophage lambda promoter vectors for overproduction of proteins in Escherichia coli.

Authors:  C A Love; P E Lilley; N E Dixon
Journal:  Gene       Date:  1996-10-17       Impact factor: 3.688

7.  Growth-rate recovery of Escherichia coli cultures carrying a multicopy plasmid, by engineering of the pentose-phosphate pathway.

Authors:  Salvador Flores; Ramón de Anda-Herrera; Guillermo Gosset; Francisco G Bolívar
Journal:  Biotechnol Bioeng       Date:  2004-08-20       Impact factor: 4.530

8.  Host strain influences on supercoiled plasmid DNA production in Escherichia coli: Implications for efficient design of large-scale processes.

Authors:  Sin Yee Yau; Eli Keshavarz-Moore; John Ward
Journal:  Biotechnol Bioeng       Date:  2008-10-15       Impact factor: 4.530

9.  Maximal limits of the Escherichia coli replication factor Y effector site sequences in pBR322 DNA.

Authors:  K J Marians; W Soeller; S L Zipursky
Journal:  J Biol Chem       Date:  1982-05-25       Impact factor: 5.157

10.  Effects of the presence of ColE1 plasmid DNA in Escherichia coli on the host cell metabolism.

Authors:  Zhijun Wang; Li Xiang; Junjie Shao; Alicja Wegrzyn; Grzegorz Wegrzyn
Journal:  Microb Cell Fact       Date:  2006-11-17       Impact factor: 5.328

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  13 in total

1.  Vector insert-targeted integrative antisense expression system for plasmid stabilization.

Authors:  Jeremy M Luke; Aaron E Carnes; Clague P Hodgson; James A Williams
Journal:  Mol Biotechnol       Date:  2011-01       Impact factor: 2.695

2.  Coexpressed RIG-I agonist enhances humoral immune response to influenza virus DNA vaccine.

Authors:  Jeremy M Luke; Gregory G Simon; Jonas Söderholm; John S Errett; J Thomas August; Michael Gale; Clague P Hodgson; James A Williams
Journal:  J Virol       Date:  2010-11-24       Impact factor: 5.103

3.  Critical design criteria for minimal antibiotic-free plasmid vectors necessary to combine robust RNA Pol II and Pol III-mediated eukaryotic expression with high bacterial production yields.

Authors:  Aaron E Carnes; Jeremy M Luke; Justin M Vincent; Sheryl Anderson; Angela Schukar; Clague P Hodgson; James A Williams
Journal:  J Gene Med       Date:  2010-10       Impact factor: 4.565

Review 4.  Plasmid DNA vaccine vector design: impact on efficacy, safety and upstream production.

Authors:  James A Williams; Aaron E Carnes; Clague P Hodgson
Journal:  Biotechnol Adv       Date:  2009-02-20       Impact factor: 14.227

5.  Antibiotic-free production of a herpes simplex virus 2 DNA vaccine in a high yield cGMP process.

Authors:  Jared Nelson; Stephen Rodriguez; Neil Finlayson; Jim Williams; Aaron Carnes
Journal:  Hum Vaccin Immunother       Date:  2013-07-30       Impact factor: 3.452

6.  Effect of plasmid replication deregulation via inc mutations on E. coli proteome & simple flux model analysis.

Authors:  Jonathan Meade; Patrick Bartlow; Ram Narayan Trivedi; Parvez Akhtar; Mohammad M Ataai; Saleem A Khan; Michael M Domach
Journal:  Microb Cell Fact       Date:  2015-03-08       Impact factor: 5.328

7.  Factors affecting plasmid production in Escherichia coli from a resource allocation standpoint.

Authors:  Drew S Cunningham; Richard R Koepsel; Mohammad M Ataai; Michael M Domach
Journal:  Microb Cell Fact       Date:  2009-05-22       Impact factor: 5.328

8.  Development of new plasmid DNA vaccine vectors with R1-based replicons.

Authors:  Diana M Bower; Kristala L J Prather
Journal:  Microb Cell Fact       Date:  2012-08-13       Impact factor: 5.328

9.  Increasing plasmid-based DNA vaccine construct (16 kb pSVK-HBVA) production in Escherichia coli XL10-Gold through optimization of media component.

Authors:  Yu Wang; Liang Zhang; Wei Zhang; Hao Wu; Xiao Ming Zhu; Yuan Ji Xu; Jin Qi Yan; Ji Yun Yu
Journal:  Biotechnol Biotechnol Equip       Date:  2015-01-22       Impact factor: 1.632

Review 10.  Vector Design for Improved DNA Vaccine Efficacy, Safety and Production.

Authors:  James A Williams
Journal:  Vaccines (Basel)       Date:  2013-06-25
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