Literature DB >> 19406787

Description of 'Synergistetes' phyl. nov. and emended description of the phylum 'Deferribacteres' and of the family Syntrophomonadaceae, phylum 'Firmicutes'.

Estelle Jumas-Bilak1, Laurent Roudière, Hélène Marchandin.   

Abstract

The number of bacterial phyla has greatly increased in the past decade. Among them, a candidate division named 'Synergistes' was proposed in a phylogenetic study on the global diversity of bacteria. We previously described the genus Jonquetella and suggested that it belonged to this not yet well-delineated candidate phylum. 16S rRNA gene based-phylogeny studies were conducted using four reconstruction methods and 599 sequences forming five datasets were used in an alternative treeing approach. These analyses indicated that the genera Aminiphilus, Aminobacterium, Aminomonas, Anaerobaculum, Dethiosulfovibrio, Jonquetella, Synergistes, Thermanaerovibrio and Thermovirga should be grouped in the same high-level taxon. This taxon was shown to be a phylum-rank lineage in the domain Bacteria and, because of the prior use of the name Synergistes for a genus, the name 'Synergistetes' is proposed for this candidate phylum. We also propose an emended delineation of the phylum 'Deferribacteres', which is now only represented by the family Deferribacteriaceae. The emended family Syntrophomonadaceae is limited to the genera Pelospora, Syntrophomonas, Syntrophothermus and Thermosyntropha.

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Year:  2009        PMID: 19406787     DOI: 10.1099/ijs.0.006718-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  41 in total

1.  Bacterial Diversity in Microbial Mats and Sediments from the Atacama Desert.

Authors:  Maria Cecilia Rasuk; Ana Beatriz Fernández; Daniel Kurth; Manuel Contreras; Fernando Novoa; Daniel Poiré; María Eugenia Farías
Journal:  Microb Ecol       Date:  2015-07-30       Impact factor: 4.552

2.  Ecological significance of Synergistetes in the biological treatment of tuna cooking wastewater by an anaerobic sequencing batch reactor.

Authors:  Cécile Militon; Olfa Hamdi; Valerie Michotey; Marie-Laure Fardeau; Bernard Ollivier; Hassib Bouallagui; Moktar Hamdi; Patricia Bonin
Journal:  Environ Sci Pollut Res Int       Date:  2015-07-22       Impact factor: 4.223

3.  A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life.

Authors:  Donovan H Parks; Maria Chuvochina; David W Waite; Christian Rinke; Adam Skarshewski; Pierre-Alain Chaumeil; Philip Hugenholtz
Journal:  Nat Biotechnol       Date:  2018-08-27       Impact factor: 54.908

4.  Identification of a novel acetate-utilizing bacterium belonging to Synergistes group 4 in anaerobic digester sludge.

Authors:  Tsukasa Ito; Kazumi Yoshiguchi; Herto Dwi Ariesyady; Satoshi Okabe
Journal:  ISME J       Date:  2011-05-12       Impact factor: 10.302

Review 5.  Taxonomic hierarchy of the phylum Firmicutes and novel Firmicutes species originated from various environments in Korea.

Authors:  Chi Nam Seong; Joo Won Kang; Ji Hee Lee; So Yeon Seo; Jung Jae Woo; Chul Park; Kyung Sook Bae; Mi Sun Kim
Journal:  J Microbiol       Date:  2018-01-04       Impact factor: 3.422

Review 6.  Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria).

Authors:  Thomas Cavalier-Smith; Ema E-Yung Chao
Journal:  Protoplasma       Date:  2020-01-03       Impact factor: 3.356

Review 7.  Composition and development of oral bacterial communities.

Authors:  Robert J Palmer
Journal:  Periodontol 2000       Date:  2014-02       Impact factor: 7.589

8.  Methanogenic and Sulfate-Reducing Activities in a Hypersaline Microbial Mat and Associated Microbial Diversity.

Authors:  Santiago Cadena; José Q García-Maldonado; Nguyen E López-Lozano; Francisco J Cervantes
Journal:  Microb Ecol       Date:  2017-11-08       Impact factor: 4.552

9.  Cloacibacillus sp., a Potential Human Pathogen Associated with Bacteremia in Quebec and New Brunswick.

Authors:  M-C Domingo; C Yansouni; C Gaudreau; F Lamothe; S Lévesque; C Tremblay; R Garceau
Journal:  J Clin Microbiol       Date:  2015-07-29       Impact factor: 5.948

10.  Cultivation of a Synergistetes strain representing a previously uncultivated lineage.

Authors:  S R Vartoukian; R M Palmer; W G Wade
Journal:  Environ Microbiol       Date:  2010-01-13       Impact factor: 5.491

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