Literature DB >> 19404457

How single molecule detection measures the dynamic actions of life.

Yoshiharu Ishii, Toshio Yanagida.   

Abstract

Biomolecules dynamically work in cells in which a variety of molecules assemble and interact in unique manner. The molecular mechanisms underlying several biological processes have been elucidated from the results obtained from the descriptions of cell function, from the snapshots of the structures of biomolecules involved in these processes, and from the biochemical properties of these reactions in vitro. Recently developed single molecule measurements have revealed the dynamic properties of the biomolecules that have been hidden in the data that have been averaged over large numbers of molecules in both ensemble measurement and in cells. Single molecule imaging and manipulation of single molecules have allowed the visualization of the dynamic operations of molecular motors, enzymatic reactions, structural dynamics of biomolecules, and cell signaling processes. The results have shown that the single molecule techniques are powerful tools to monitor the dynamic actions of biomolecules and their assemblies. This approach has been applied to a variety of fields within the life sciences. As new information emerges about the dynamic actions of biomolecules using methods of single molecule detection new views on how biological processes work will be revealed.

Year:  2007        PMID: 19404457      PMCID: PMC2645551          DOI: 10.2976/1.2723643/10.2976/1

Source DB:  PubMed          Journal:  HFSP J        ISSN: 1955-205X


  102 in total

1.  Watching proteins fold one molecule at a time.

Authors:  Elizabeth Rhoades; Eugene Gussakovsky; Gilad Haran
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-28       Impact factor: 11.205

2.  Diffusion dynamics of glycine receptors revealed by single-quantum dot tracking.

Authors:  Maxime Dahan; Sabine Lévi; Camilla Luccardini; Philippe Rostaing; Béatrice Riveau; Antoine Triller
Journal:  Science       Date:  2003-10-17       Impact factor: 47.728

3.  Chemomechanical coupling of the forward and backward steps of single kinesin molecules.

Authors:  Masayoshi Nishiyama; Hideo Higuchi; Toshio Yanagida
Journal:  Nat Cell Biol       Date:  2002-10       Impact factor: 28.824

4.  Loading direction regulates the affinity of ADP for kinesin.

Authors:  Sotaro Uemura; Shin'ichi Ishiwata
Journal:  Nat Struct Biol       Date:  2003-04

5.  The depolymerizing kinesin MCAK uses lattice diffusion to rapidly target microtubule ends.

Authors:  Jonne Helenius; Gary Brouhard; Yannis Kalaidzidis; Stefan Diez; Jonathon Howard
Journal:  Nature       Date:  2006-05-04       Impact factor: 49.962

6.  Direct observation of individual RecA filaments assembling on single DNA molecules.

Authors:  Roberto Galletto; Ichiro Amitani; Ronald J Baskin; Stephen C Kowalczykowski
Journal:  Nature       Date:  2006-09-20       Impact factor: 49.962

7.  Single-molecule measurement of protein folding kinetics.

Authors:  Everett A Lipman; Benjamin Schuler; Olgica Bakajin; William A Eaton
Journal:  Science       Date:  2003-08-29       Impact factor: 47.728

8.  Direct observation of kinesin stepping by optical trapping interferometry.

Authors:  K Svoboda; C F Schmidt; B J Schnapp; S M Block
Journal:  Nature       Date:  1993-10-21       Impact factor: 49.962

9.  Elasticity and unfolding of single molecules of the giant muscle protein titin.

Authors:  L Tskhovrebova; J Trinick; J A Sleep; R M Simmons
Journal:  Nature       Date:  1997-05-15       Impact factor: 49.962

10.  Observation of internal cleavage and ligation reactions of a ribozyme.

Authors:  Michelle K Nahas; Timothy J Wilson; Sungchul Hohng; Kaera Jarvie; David M J Lilley; Taekjip Ha
Journal:  Nat Struct Mol Biol       Date:  2004-10-10       Impact factor: 15.369

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  2 in total

1.  Measuring molecular motor forces in vivo: implications for tug-of-war models of bidirectional transport.

Authors:  Christina Leidel; Rafael A Longoria; Franciso Marquez Gutierrez; George T Shubeita
Journal:  Biophys J       Date:  2012-08-08       Impact factor: 4.033

2.  Autonomy and robustness of translocation through the nuclear pore complex: a single-molecule study.

Authors:  Thomas Dange; David Grünwald; Antje Grünwald; Reiner Peters; Ulrich Kubitscheck
Journal:  J Cell Biol       Date:  2008-09-29       Impact factor: 10.539

  2 in total

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