Literature DB >> 19399626

Metabolomics: moving to the clinic.

Anders Nordström1, Rolf Lewensohn.   

Abstract

Assessment of a biological system by means of global and non-targeted metabolite profiling--metabolomics or metabonomics--provides the investigator with molecular information that is close to the phenotype in question in the sense that metabolites are an ultimate product of gene, mRNA, and protein activity. Over the last few years, there has been a rapidly growing number of metabolomics applications aimed at finding biomarkers which could assist diagnosis, provide therapy guidance, and evaluate response to therapy for particular diseases. Also, within the fields of drug discovery, drug toxicology, and personalized pharmacology, metabolomics is emerging as a powerful tool. This review seeks to update the reader on analytical strategies, biomarker findings, and implications of metabolomics for the clinic. Particular attention is paid to recent biomarkers found related to neurological, cardiovascular, and cancer diseases. Moreover, the impact of metabolomics in the drug discovery and development process is examined.

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Year:  2009        PMID: 19399626     DOI: 10.1007/s11481-009-9156-4

Source DB:  PubMed          Journal:  J Neuroimmune Pharmacol        ISSN: 1557-1890            Impact factor:   4.147


  108 in total

1.  Ionizable isotopic labeling reagent for relative quantification of amine metabolites by mass spectrometry.

Authors:  Michael R Shortreed; Shane M Lamos; Brian L Frey; Margaret F Phillips; Madhusudan Patel; Peter J Belshaw; Lloyd M Smith
Journal:  Anal Chem       Date:  2006-09-15       Impact factor: 6.986

Review 2.  Biomarkers for neuroAIDS: the widening scope of metabolomics.

Authors:  Gurudutt Pendyala; Elizabeth J Want; William Webb; Gary Siuzdak; Howard S Fox
Journal:  J Neuroimmune Pharmacol       Date:  2006-10-10       Impact factor: 4.147

3.  Multiple ionization mass spectrometry strategy used to reveal the complexity of metabolomics.

Authors:  Anders Nordström; Elizabeth Want; Trent Northen; Janne Lehtiö; Gary Siuzdak
Journal:  Anal Chem       Date:  2007-12-18       Impact factor: 6.986

4.  Metabolomic analysis and signatures in motor neuron disease.

Authors:  Steve Rozen; Merit E Cudkowicz; Mikhail Bogdanov; Wayne R Matson; Bruce S Kristal; Chris Beecher; Scott Harrison; Paul Vouros; Jimmy Flarakos; Karen Vigneau-Callahan; Theodore D Matson; Kristyn M Newhall; M Flint Beal; Robert H Brown; Rima Kaddurah-Daouk
Journal:  Metabolomics       Date:  2005       Impact factor: 4.290

5.  Cerebrospinal fluid metabolic profiles in multiple sclerosis and degenerative dementias obtained by high resolution proton magnetic resonance spectroscopy.

Authors:  F Nicoli; J Vion-Dury; S Confort-Gouny; S Maillet; J L Gastaut; P J Cozzone
Journal:  C R Acad Sci III       Date:  1996-07

6.  A new rule-based algorithm for identifying metabolic markers in prostate cancer using tandem mass spectrometry.

Authors:  Melanie Osl; Stephan Dreiseitl; Bernhard Pfeifer; Klaus Weinberger; Helmut Klocker; Georg Bartsch; Georg Schäfer; Bernhard Tilg; Armin Graber; Christian Baumgartner
Journal:  Bioinformatics       Date:  2008-09-24       Impact factor: 6.937

7.  Prediction of acute cellular renal allograft rejection by urinary metabolomics using MALDI-FTMS.

Authors:  Ji-Na Wang; Ying Zhou; Tong-Yu Zhu; Xiangdong Wang; Yin-Long Guo
Journal:  J Proteome Res       Date:  2008-07-12       Impact factor: 4.466

8.  Toward improved grading of malignancy in oligodendrogliomas using metabolomics.

Authors:  G Erb; K Elbayed; M Piotto; J Raya; A Neuville; M Mohr; D Maitrot; P Kehrli; I J Namer
Journal:  Magn Reson Med       Date:  2008-05       Impact factor: 4.668

9.  Ultra-high performance liquid chromatography-mass spectrometry for the metabolomic analysis of urine in colorectal cancer.

Authors:  Yan-Lei Ma; Huan-Long Qin; Wei-Jie Liu; Jia-Yuan Peng; Long Huang; Xiao-Ping Zhao; Yi-Yu Cheng
Journal:  Dig Dis Sci       Date:  2009-12       Impact factor: 3.199

10.  Matrix-suppressed laser desorption/ionisation mass spectrometry and its suitability for metabolome analyses.

Authors:  Seetharaman Vaidyanathan; Simon Gaskell; Royston Goodacre
Journal:  Rapid Commun Mass Spectrom       Date:  2006       Impact factor: 2.419

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  43 in total

1.  Global urinary metabolic profiling procedures using gas chromatography-mass spectrometry.

Authors:  Eric Chun Yong Chan; Kishore Kumar Pasikanti; Jeremy K Nicholson
Journal:  Nat Protoc       Date:  2011-09-08       Impact factor: 13.491

2.  Metabolic alterations in the sera of Chinese patients with mild persistent asthma: a GC-MS-based metabolomics analysis.

Authors:  Chun Chang; Zhi-guo Guo; Bei He; Wan-zhen Yao
Journal:  Acta Pharmacol Sin       Date:  2015-11       Impact factor: 6.150

Review 3.  Mass spectrometry strategies for clinical metabolomics and lipidomics in psychiatry, neurology, and neuro-oncology.

Authors:  Paul L Wood
Journal:  Neuropsychopharmacology       Date:  2013-07-11       Impact factor: 7.853

Review 4.  Review of mass spectrometry-based metabolomics in cancer research.

Authors:  David B Liesenfeld; Nina Habermann; Robert W Owen; Augustin Scalbert; Cornelia M Ulrich
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2013-10-04       Impact factor: 4.254

5.  Capturing global metabolism.

Authors:  Don Cowan; Marla Tuffin
Journal:  Nat Biotechnol       Date:  2009-12       Impact factor: 54.908

Review 6.  Biomarkers of acute kidney injury in children: discovery, evaluation, and clinical application.

Authors:  Zubaida Al-Ismaili; Ana Palijan; Michael Zappitelli
Journal:  Pediatr Nephrol       Date:  2010-07-10       Impact factor: 3.714

7.  DNA sequencing and metabolomics: new approaches to the forensic assessment of herbal therapeutic agents.

Authors:  Roger W Byard; Ian Musgrave; Claire Hoban; Michael Bunce
Journal:  Forensic Sci Med Pathol       Date:  2014-02-11       Impact factor: 2.007

Review 8.  Metabolomic Biomarkers of Prostate Cancer: Prediction, Diagnosis, Progression, Prognosis, and Recurrence.

Authors:  Rachel S Kelly; Matthew G Vander Heiden; Edward Giovannucci; Lorelei A Mucci
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2016-04-06       Impact factor: 4.254

9.  Proteomic and metabolomic strategies to investigate HIV-associated neurocognitive disorders.

Authors:  Gurudutt Pendyala; Howard S Fox
Journal:  Genome Med       Date:  2010-03-30       Impact factor: 11.117

10.  Advances in the "omics" for diagnosis, pathogenesis, and therapeutic development.

Authors:  Howard S Fox
Journal:  J Neuroimmune Pharmacol       Date:  2010-02-09       Impact factor: 4.147

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