Literature DB >> 19392406

Hybrid elastic and discrete-particle approach to biomembrane dynamics with application to the mobility of curved integral membrane proteins.

Ali Naji1, Paul J Atzberger, Frank L H Brown.   

Abstract

We introduce a simulation strategy to consistently couple continuum biomembrane dynamics to the motion of discrete biological macromolecules residing within or on the membrane. The methodology is used to study the diffusion of integral membrane proteins that impart a curvature on the bilayer surrounding them. Such proteins exhibit a substantial reduction in diffusion coefficient relative to "flat" proteins; this effect is explained by elementary hydrodynamic considerations.

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Year:  2009        PMID: 19392406     DOI: 10.1103/PhysRevLett.102.138102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  11 in total

1.  Drag forces on inclusions in classical fields with dissipative dynamics.

Authors:  V Démery; D S Dean
Journal:  Eur Phys J E Soft Matter       Date:  2010-08-29       Impact factor: 1.890

2.  Strong influence of periodic boundary conditions on lateral diffusion in lipid bilayer membranes.

Authors:  Brian A Camley; Michael G Lerner; Richard W Pastor; Frank L H Brown
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

3.  Curvature correction to the mobility of fluid membrane inclusions.

Authors:  D R Daniels
Journal:  Eur Phys J E Soft Matter       Date:  2016-10-24       Impact factor: 1.890

4.  Shape matters in protein mobility within membranes.

Authors:  François Quemeneur; Jon K Sigurdsson; Marianne Renner; Paul J Atzberger; Patricia Bassereau; David Lacoste
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-24       Impact factor: 11.205

5.  Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation.

Authors:  Melanie P Muller; Tao Jiang; Chang Sun; Muyun Lihan; Shashank Pant; Paween Mahinthichaichan; Anda Trifan; Emad Tajkhorshid
Journal:  Chem Rev       Date:  2019-04-12       Impact factor: 60.622

6.  Simple differences in the protein-membrane attachment mechanism have functional consequences for surface mechanics.

Authors:  K Sapp; L Maibaum; A J Sodt
Journal:  J Chem Phys       Date:  2019-10-28       Impact factor: 3.488

7.  Saffman-Delbrück and beyond: A pointlike approach.

Authors:  Quentin Goutaland; Jean-Baptiste Fournier
Journal:  Eur Phys J E Soft Matter       Date:  2019-12-17       Impact factor: 1.890

8.  A continuum membrane model can predict curvature sensing by helix insertion.

Authors:  Yiben Fu; Wade F Zeno; Jeanne C Stachowiak; Margaret E Johnson
Journal:  Soft Matter       Date:  2021-12-08       Impact factor: 3.679

9.  Seeing the Forest in Lieu of the Trees: Continuum Simulations of Cell Membranes at Large Length Scales.

Authors:  Kayla Sapp; Roie Shlomovitz; Lutz Maibaum
Journal:  Annu Rep Comput Chem       Date:  2014-12-04

10.  Suppressing membrane height fluctuations leads to a membrane-mediated interaction among proteins.

Authors:  Kayla Sapp; Lutz Maibaum
Journal:  Phys Rev E       Date:  2016-11-29       Impact factor: 2.529

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