Literature DB >> 19392405

Prediction of spatiotemporal patterns of neural activity from pairwise correlations.

O Marre1, S El Boustani, Y Frégnac, A Destexhe.   

Abstract

We designed a model-based analysis to predict the occurrence of population patterns in distributed spiking activity. Using a maximum entropy principle with a Markovian assumption, we obtain a model that accounts for both spatial and temporal pairwise correlations among neurons. This model is tested on data generated with a Glauber spin-glass system and is shown to correctly predict the occurrence probabilities of spatiotemporal patterns significantly better than Ising models only based on spatial correlations. This increase of predictability was also observed on experimental data recorded in parietal cortex during slow-wave sleep. This approach can also be used to generate surrogates that reproduce the spatial and temporal correlations of a given data set.

Mesh:

Year:  2009        PMID: 19392405     DOI: 10.1103/PhysRevLett.102.138101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  41 in total

1.  A discrete time neural network model with spiking neurons: II: dynamics with noise.

Authors:  B Cessac
Journal:  J Math Biol       Date:  2010-07-24       Impact factor: 2.259

2.  The Identity of Information: How Deterministic Dependencies Constrain Information Synergy and Redundancy.

Authors:  Daniel Chicharro; Giuseppe Pica; Stefano Panzeri
Journal:  Entropy (Basel)       Date:  2018-03-05       Impact factor: 2.524

3.  A generative spike train model with time-structured higher order correlations.

Authors:  James Trousdale; Yu Hu; Eric Shea-Brown; Krešimir Josić
Journal:  Front Comput Neurosci       Date:  2013-07-17       Impact factor: 2.380

4.  Fast inference of interactions in assemblies of stochastic integrate-and-fire neurons from spike recordings.

Authors:  Remi Monasson; Simona Cocco
Journal:  J Comput Neurosci       Date:  2011-01-11       Impact factor: 1.621

5.  Sparse low-order interaction network underlies a highly correlated and learnable neural population code.

Authors:  Elad Ganmor; Ronen Segev; Elad Schneidman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-20       Impact factor: 11.205

6.  Sloppiness in spontaneously active neuronal networks.

Authors:  Dagmara Panas; Hayder Amin; Alessandro Maccione; Oliver Muthmann; Mark van Rossum; Luca Berdondini; Matthias H Hennig
Journal:  J Neurosci       Date:  2015-06-03       Impact factor: 6.167

7.  The Population Tracking Model: A Simple, Scalable Statistical Model for Neural Population Data.

Authors:  Cian O'Donnell; J Tiago Gonçalves; Nick Whiteley; Carlos Portera-Cailliau; Terrence J Sejnowski
Journal:  Neural Comput       Date:  2016-11-21       Impact factor: 2.026

8.  Gibbs distribution analysis of temporal correlations structure in retina ganglion cells.

Authors:  J C Vasquez; O Marre; A G Palacios; M J Berry; B Cessac
Journal:  J Physiol Paris       Date:  2011-11-17

9.  Predicting single-neuron activity in locally connected networks.

Authors:  Feraz Azhar; William S Anderson
Journal:  Neural Comput       Date:  2012-07-30       Impact factor: 2.026

10.  Collective dynamics in human and monkey sensorimotor cortex: predicting single neuron spikes.

Authors:  Wilson Truccolo; Leigh R Hochberg; John P Donoghue
Journal:  Nat Neurosci       Date:  2009-12-06       Impact factor: 24.884

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