Literature DB >> 19389554

Clinical proteomic applications of formalin-fixed paraffin-embedded tissues.

Josip Blonder1, Timothy D Veenstra.   

Abstract

Although proteomic technology has proved to be extremely powerful in basic research, its impact has not been as great in the clinical laboratory. The future, however, looks extremely positive because technologies, such as mass spectrometry and tissue microarrays, have continued to improve over the past several years. One of the most exciting developments, particularly in the area of mass spectrometry, is the ability to examine formalin-fixed paraffin-embedded tissue using these technologies. The almost inexhaustible supply of these tissues will enable proteomic laboratories access to clinically important specimens that will undoubtedly lead to a number of important discoveries in the near future.

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Year:  2009        PMID: 19389554     DOI: 10.1016/j.cll.2009.01.006

Source DB:  PubMed          Journal:  Clin Lab Med        ISSN: 0272-2712            Impact factor:   1.935


  10 in total

1.  The ups and downs of DNA repair biomarkers for PARP inhibitor therapies.

Authors:  Xiaozhe Wang; David T Weaver
Journal:  Am J Cancer Res       Date:  2010-01-03       Impact factor: 6.166

2.  Improving the Proteomic Analysis of Archival Tissue by Using Pressure-Assisted Protein Extraction: A Mechanistic Approach.

Authors:  Carol B Fowler; Timothy J O'Leary; Jeffrey T Mason
Journal:  J Proteomics Bioinform       Date:  2014-06-24

3.  Assessment of the 2-d gel-based proteomics application of clinically archived formalin-fixed paraffin embedded tissues.

Authors:  Katarina Davalieva; Sanja Kiprijanovska; Momir Polenakovic
Journal:  Protein J       Date:  2014-04       Impact factor: 2.371

Review 4.  Tissue proteomics in pancreatic cancer study: discovery, emerging technologies, and challenges.

Authors:  Sheng Pan; Teresa A Brentnall; Kimberly Kelly; Ru Chen
Journal:  Proteomics       Date:  2013-01-07       Impact factor: 3.984

Review 5.  Comparative evaluation of two methods for LC-MS/MS proteomic analysis of formalin fixed and paraffin embedded tissues.

Authors:  Katarina Davalieva; Sanja Kiprijanovska; Aleksandar Dimovski; Gorazd Rosoklija; Andrew J Dwork
Journal:  J Proteomics       Date:  2021-01-14       Impact factor: 4.044

6.  Pressure-assisted protein extraction: a novel method for recovering proteins from archival tissue for proteomic analysis.

Authors:  Carol B Fowler; Timothy J Waybright; Timothy D Veenstra; Timothy J O'Leary; Jeffrey T Mason
Journal:  J Proteome Res       Date:  2012-03-07       Impact factor: 4.466

7.  Genome Medicine: past, present and future.

Authors:  Charles Auffray; Timothy Caulfield; Muin J Khoury; James R Lupski; Matthias Schwab; Timothy Veenstra
Journal:  Genome Med       Date:  2011-01-31       Impact factor: 11.117

8.  Initial development and validation of a novel extraction method for quantitative mining of the formalin-fixed, paraffin-embedded tissue proteome for biomarker investigations.

Authors:  Niroshini J Nirmalan; Christopher Hughes; Jianhe Peng; Therese McKenna; James Langridge; David A Cairns; Patricia Harnden; Peter J Selby; Rosamonde E Banks
Journal:  J Proteome Res       Date:  2010-12-23       Impact factor: 4.466

9.  Proteomics portrait of archival lesions of chronic pancreatitis.

Authors:  Sheng Pan; Ru Chen; Tyler Stevens; Mary P Bronner; Damon May; Yasuko Tamura; Martin W McIntosh; Teresa A Brentnall
Journal:  PLoS One       Date:  2011-11-23       Impact factor: 3.240

10.  Critical comparison of sample preparation strategies for shotgun proteomic analysis of formalin-fixed, paraffin-embedded samples: insights from liver tissue.

Authors:  Alessandro Tanca; Marcello Abbondio; Salvatore Pisanu; Daniela Pagnozzi; Sergio Uzzau; Maria Filippa Addis
Journal:  Clin Proteomics       Date:  2014-07-08       Impact factor: 3.988

  10 in total

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