Literature DB >> 19369435

Performance of the Abbott real-time PCR assay using m2000sp and m2000rt for hepatitis C virus RNA quantification.

Stéphane Chevaliez1, Magali Bouvier-Alias, Jean-Michel Pawlotsky.   

Abstract

Quantification of hepatitis C virus (HCV) RNA is essential for the everyday management of chronic hepatitis C therapy. "Real-time" PCR techniques are potentially more sensitive than classical PCR techniques, are not prone to carryover contamination, and have a consistently wider dynamic range of quantification. Thus, they are rapidly replacing other technologies for routine quantification of HCV RNA. We extensively evaluated the intrinsic characteristics and clinical performance of the m2000(sp)-m2000(rt) Abbott real-time PCR platform for HCV RNA quantification. The study shows that the m2000(sp)-m2000(rt) platform is sensitive, specific, and precise; that the results are reproducible; and that the platform has a broad dynamic range of quantification. When comparing HCV RNA levels measured in the same individuals with the m2000(sp)-m2000(rt) platform and the third-generation branched-DNA assay, a trend toward a modest overestimation of HCV RNA levels was observed in the m2000(sp)-m2000(rt) platform in all genotypes except genotype 5. The differences, however, were unlikely to have any impact in clinical practice. In conclusion, our study shows that the Abbott m2000 real-time PCR system for HCV RNA quantification is sensitive, specific, and precise; that the results are reproducible; and that the platform's broad dynamic range of quantification is well suited to HCV RNA monitoring in the clinical setting.

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Year:  2009        PMID: 19369435      PMCID: PMC2691100          DOI: 10.1128/JCM.01300-08

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  27 in total

1.  Strengths and limitations of commercial tests for hepatitis C virus RNA quantification.

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2.  The Cobas AmpliPrep-Cobas TaqMan real-time polymerase chain reaction assay fails to detect hepatitis C virus RNA in highly viremic genotype 4 clinical samples.

Authors:  Stéphane Chevaliez; Magali Bouvier-Alias; Laurent Castéra; Jean-Michel Pawlotsky
Journal:  Hepatology       Date:  2009-04       Impact factor: 17.425

Review 3.  Use and interpretation of virological tests for hepatitis C.

Authors:  Jean-Michel Pawlotsky
Journal:  Hepatology       Date:  2002-11       Impact factor: 17.425

4.  Performance of the New Bayer VERSANT HCV RNA 3.0 assay for quantitation of hepatitis C virus RNA in plasma and serum: conversion to international units and comparison with the Roche COBAS Amplicor HCV Monitor, Version 2.0, assay.

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Journal:  J Clin Microbiol       Date:  2002-03       Impact factor: 5.948

5.  Evaluation of the VERSANT HCV RNA 3.0 assay for quantification of hepatitis C virus RNA in serum.

Authors:  Pascale Trimoulet; Philippe Halfon; Eric Pohier; Hacène Khiri; Geneviève Chêne; Hervé Fleury
Journal:  J Clin Microbiol       Date:  2002-06       Impact factor: 5.948

Review 6.  Molecular diagnosis of viral hepatitis.

Authors:  Jean-Michel Pawlotsky
Journal:  Gastroenterology       Date:  2002-05       Impact factor: 22.682

7.  Multicenter evaluation of the VERSANT HCV RNA qualitative assay for detection of hepatitis C virus RNA.

Authors:  David A Hendricks; Michel Friesenhahn; Lorine Tanimoto; Bernd Goergen; Deborah Dodge; Lorraine Comanor
Journal:  J Clin Microbiol       Date:  2003-02       Impact factor: 5.948

8.  Early virologic response to treatment with peginterferon alfa-2b plus ribavirin in patients with chronic hepatitis C.

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Journal:  Hepatology       Date:  2003-09       Impact factor: 17.425

9.  Standardized hepatitis C virus RNA panels for nucleic acid testing assays.

Authors:  P A Jorgensen; P D Neuwald
Journal:  J Clin Virol       Date:  2001-01       Impact factor: 3.168

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Journal:  J Clin Microbiol       Date:  2004-02       Impact factor: 5.948

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  19 in total

Review 1.  New virologic tools for management of chronic hepatitis B and C.

Authors:  Stéphane Chevaliez; Christophe Rodriguez; Jean-Michel Pawlotsky
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2.  European Multicenter Study on Analytical Performance of DxN Veris System HCV Assay.

Authors:  Patrick Braun; Rafael Delgado; Monica Drago; Diana Fanti; Hervé Fleury; Maria Rita Gismondo; Jörg Hofmann; Jacques Izopet; Sebastian Kühn; Alessandra Lombardi; Maria Angeles Marcos; Karine Sauné; Siobhan O'Shea; Alfredo Pérez-Rivilla; John Ramble; Pascale Trimoulet; Jordi Vila; Duncan Whittaker; Alain Artus; Daniel W Rhodes
Journal:  J Clin Microbiol       Date:  2017-02-01       Impact factor: 5.948

3.  Performance of the Abbott RealTime and Roche Cobas TaqMan hepatitis C virus (HCV) assays for quantification of HCV genotypes.

Authors:  Heidi LaRue; Lisa Rigali; Joan-Miquel Balada-Llasat; Preeti Pancholi
Journal:  J Clin Microbiol       Date:  2012-02-29       Impact factor: 5.948

Review 4.  KASL clinical practice guidelines: management of hepatitis C.

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Journal:  Clin Mol Hepatol       Date:  2016-03-28

Review 5.  Hepatitis C virus infection in the human immunodeficiency virus infected patient.

Authors:  Louise Nygaard Clausen; Lene Fogt Lundbo; Thomas Benfield
Journal:  World J Gastroenterol       Date:  2014-09-14       Impact factor: 5.742

6.  Analytical variables influencing the HCV RNA determination by TaqMan real-time PCR in routine clinical laboratory practice.

Authors:  Abida Raza; Zameer Ali; Javaid Irfan; Shahnaz Murtaza; Samina Shakeel
Journal:  Mol Biol Rep       Date:  2012-02-12       Impact factor: 2.316

7.  Second-generation Cobas AmpliPrep/Cobas TaqMan HCV quantitative test for viral load monitoring: a novel dual-probe assay design.

Authors:  Heike Zitzer; Gabrielle Heilek; Karine Truchon; Simone Susser; Johannes Vermehren; Dorothea Sizmann; Bryan Cobb; Christoph Sarrazin
Journal:  J Clin Microbiol       Date:  2012-12-12       Impact factor: 5.948

Review 8.  Treatment of hepatitis C: how will we use viral kinetics, response-guided therapy?

Authors:  Jean-Michel Pawlotsky
Journal:  Curr Gastroenterol Rep       Date:  2013-02

9.  A novel duplex real-time reverse transcriptase-polymerase chain reaction assay for the detection of hepatitis C viral RNA with armored RNA as internal control.

Authors:  Shuang Meng; Jinming Li
Journal:  Virol J       Date:  2010-06-07       Impact factor: 4.099

10.  Development of a new duplex real-time polymerase chain reaction assay for hepatitis B viral DNA detection.

Authors:  Shipeng Sun; Shuang Meng; Rui Zhang; Kuo Zhang; Lunan Wang; Jinming Li
Journal:  Virol J       Date:  2011-05-14       Impact factor: 4.099

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