Literature DB >> 19369426

Specific and global regulation of mRNA stability during osmotic stress in Saccharomyces cerevisiae.

Lorena Romero-Santacreu1, Joaquín Moreno, José E Pérez-Ortín, Paula Alepuz.   

Abstract

Hyperosmotic stress yields reprogramming of gene expression in Saccharomyces cerevisiae cells. Most of this response is orchestrated by Hog1, a stress-activated, mitogen-activated protein kinase (MAPK) homologous to human p38. We investigated, on a genomic scale, the contribution of changes in transcription rates and mRNA stabilities to the modulation of mRNA amounts during the response to osmotic stress in wild-type and hog1 mutant cells. Mild osmotic shock induces a broad mRNA destabilization; however, osmo-mRNAs are up-regulated by increasing both transcription rates and mRNA half-lives. In contrast, mild or severe osmotic stress in hog1 mutants, or severe osmotic stress in wild-type cells, yields global mRNA stabilization and sequestration of mRNAs into P-bodies. After adaptation, the absence of Hog1 affects the kinetics of P-bodies disassembly and the return of mRNAs to translation. Our results indicate that regulation of mRNA turnover contributes to coordinate gene expression upon osmotic stress, and that there are both specific and global controls of mRNA stability depending on the strength of the osmotic stress.

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Year:  2009        PMID: 19369426      PMCID: PMC2685517          DOI: 10.1261/rna.1435709

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  42 in total

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5.  Global analysis of stress-regulated mRNA turnover by using cDNA arrays.

Authors:  Jinshui Fan; Xiaoling Yang; Wengong Wang; William H Wood; Kevin G Becker; Myriam Gorospe
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-29       Impact factor: 11.205

Review 6.  Dealing with osmostress through MAP kinase activation.

Authors:  Eulàlia de Nadal; Paula M Alepuz; Francesc Posas
Journal:  EMBO Rep       Date:  2002-08       Impact factor: 8.807

7.  Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors.

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10.  RNA-binding protein Csx1 mediates global control of gene expression in response to oxidative stress.

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Journal:  EMBO J       Date:  2003-12-01       Impact factor: 11.598

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  81 in total

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2.  The relative importance of transcription rate, cryptic transcription and mRNA stability on shaping stress responses in yeast.

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3.  Global Epitranscriptomics Profiling of RNA Post-Transcriptional Modifications as an Effective Tool for Investigating the Epitranscriptomics of Stress Response.

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Review 4.  Ask yeast how to burn your fats: lessons learned from the metabolic adaptation to salt stress.

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Review 5.  Single Cell RNA Sequencing in Atherosclerosis Research.

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6.  Cellular stress induces cytoplasmic RNA granules in fission yeast.

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Review 7.  Multilayered control of gene expression by stress-activated protein kinases.

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8.  Diverse environmental stresses elicit distinct responses at the level of pre-mRNA processing in yeast.

Authors:  Megan Bergkessel; Gregg B Whitworth; Christine Guthrie
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9.  Major role for mRNA stability in shaping the kinetics of gene induction.

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10.  Comparing transcription rate and mRNA abundance as parameters for biochemical pathway and network analysis.

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Journal:  PLoS One       Date:  2010-03-26       Impact factor: 3.240

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