Literature DB >> 19367470

QSPR model for bioconcentration factors of nonpolar organic compounds using molecular electronegativity distance vector descriptors.

Li-Tang Qin1, Shu-Shen Liu, Hai-Ling Liu.   

Abstract

A five-variable model (model M2) was developed for the bioconcentration factors (BCFs) of nonpolar organic compounds (NPOCs) by using molecular electronegativity distance vector (MEDV) to characterize the structures of NPOCs and variable selection and modeling based on prediction (VSMP) to select the optimum descriptors. The estimated correlation coefficient (r (2)) and the leave-one-out cross-validation correlation coefficients (q (2)) of model M2 were 0.9271 and 0.9171, respectively. The model was externally validated by splitting the whole data set into a representative training set of 85 chemicals and a validation set of 29 chemicals. The results show that the main structural factors influencing the BCFs of NPOCs are -cCc, cCcc, -Cl, and -Br (where "-" refers to a single bond and "c" refers to a conjugated bond). The quantitative structure-property relationship (QSPR) model can effectively predict the BCFs of NPOCs, and the predictions of the model can also extend the current BCF database of experimental values.

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Year:  2009        PMID: 19367470     DOI: 10.1007/s11030-009-9145-9

Source DB:  PubMed          Journal:  Mol Divers        ISSN: 1381-1991            Impact factor:   2.943


  16 in total

1.  Prediction of fish bioconcentration factors of nonpolar organic pollutants based on molecular connectivity indices.

Authors:  X Lu; S Tao; J Cao; R W Dawson
Journal:  Chemosphere       Date:  1999-09       Impact factor: 7.086

2.  Estimation of bioconcentration factors of nonionic organic compounds in fish by molecular connectivity indices and polarity correction factors.

Authors:  X Lu; S Tao; H Hu; R W Dawson
Journal:  Chemosphere       Date:  2000-11       Impact factor: 7.086

3.  An electrotopological-state index for atoms in molecules.

Authors:  L B Kier; L H Hall
Journal:  Pharm Res       Date:  1990-08       Impact factor: 4.200

4.  VSMP: a novel variable selection and modeling method based on the prediction.

Authors:  Shu-Shen Liu; Hai-Ling Liu; Chun-Sheng Yin; Lian-Sheng Wang
Journal:  J Chem Inf Comput Sci       Date:  2003 May-Jun

5.  QSPR study on the bioconcentration factors of nonionic organic compounds in fish by characteristic root index and semiempirical molecular descriptors.

Authors:  Melek Türker Saçan; Safiye Sag Erdem; Gül Altinbas Ozpinar; Isil Akmehmet Balcioglu
Journal:  J Chem Inf Comput Sci       Date:  2004 May-Jun

6.  Correlation of bioconcentration factors.

Authors:  D Mackay
Journal:  Environ Sci Technol       Date:  1982-05-01       Impact factor: 9.028

7.  Molecular electronegativity distance vector model for the prediction of bioconcentration factors in fish.

Authors:  Shu-Shen Liu; Li-Tang Qin; Hai-Ling Liu; Da-Qiang Yin
Journal:  J Mol Model       Date:  2007-12-13       Impact factor: 1.810

8.  Modeling the bioconcentration factors and bioaccumulation factors of polychlorinated biphenyls with posetic quantitative super-structure/activity relationships (QSSAR).

Authors:  Teodora Ivanciuc; Ovidiu Ivanciuc; Douglas J Klein
Journal:  Mol Divers       Date:  2006-05-19       Impact factor: 2.943

9.  A new predictive model for the bioconcentration factors of polychlorinated biphenyls (PCBs) based on the molecular electronegativity distance vector (MEDV).

Authors:  Li-Tang Qin; Shu-Shen Liu; Hai-Ling Liu; Hui-Lin Ge
Journal:  Chemosphere       Date:  2007-09-19       Impact factor: 7.086

10.  Prediction of chromatographic relative retention time of polychlorinated biphenyls from the molecular electronegativity distance vector.

Authors:  Shu-Shen Liu; Yan Liu; Da-Qian Yin; Xiao-Dong Wang; Lian-Sheng Wang
Journal:  J Sep Sci       Date:  2006-02       Impact factor: 3.645

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  2 in total

1.  First Novel Workflow for Semiquantification of Emerging Contaminants in Environmental Samples Analyzed by Gas Chromatography-Atmospheric Pressure Chemical Ionization-Quadrupole Time of Flight-Mass Spectrometry.

Authors:  Reza Aalizadeh; Varvara Nikolopoulou; Nikiforos A Alygizakis; Nikolaos S Thomaidis
Journal:  Anal Chem       Date:  2022-06-27       Impact factor: 8.008

2.  Statistical relationship between metabolic decomposition and chemical uptake predicts bioconcentration factor data for diverse chemical exposures.

Authors:  Michael A Rowland; Hannah Wear; Karen H Watanabe; Kurt A Gust; Michael L Mayo
Journal:  BMC Syst Biol       Date:  2018-08-07
  2 in total

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