Literature DB >> 19361491

The C. elegans sex determination gene laf-1 encodes a putative DEAD-box RNA helicase.

Amy Hubert1, Philip Anderson.   

Abstract

The Caenorhabditis elegans gene laf-1 is critical for both embryonic development and sex determination. Laf-1 is thought to promote male cell fates by negatively regulating expression of tra-2 in both hermaphrodites and males. We cloned laf-1 and established that it encodes a putative DEAD-box RNA helicase related to Saccharomycescerevisiae Ded1p and Drosophila Vasa. Three sequenced laf-1 mutations are missense alleles affecting a small region of the protein in or near helicase motif III. We demonstrate that the phenotypes resulting from laf-1 mutations are due to loss or reduction of laf-1 function, and that both laf-1 and a related helicase vbh-1 function in germline sex determination. Laf-1 mRNA is expressed in both males and hermaphrodites and in both the germline and soma of hermaphrodites. It is expressed at all developmental stages and is most abundant in embryos. LAF-1 is predominantly, if not exclusively, cytoplasmic and colocalizes with PGL-1 in P granules of germline precursor cells. Previous results suggest that laf-1 functions to negatively regulate expression of the sex determination protein TRA-2, and we find that the abundance of TRA-2 is modestly elevated in laf-1/+ females. We discuss potential functions of LAF-1 as a helicase and its roles in sex determination.

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Year:  2009        PMID: 19361491      PMCID: PMC2802855          DOI: 10.1016/j.ydbio.2009.04.003

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  68 in total

1.  Crystal structure and functional analysis of DEAD-box protein Dhh1p.

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2.  Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa.

Authors:  Toru Sengoku; Osamu Nureki; Akira Nakamura; Satoru Kobayashi; Shigeyuki Yokoyama
Journal:  Cell       Date:  2006-04-21       Impact factor: 41.582

3.  Discriminatory RNP remodeling by the DEAD-box protein DED1.

Authors:  Heath A Bowers; Patricia A Maroney; Margaret E Fairman; Berthold Kastner; Reinhard Lührmann; Timothy W Nilsen; Eckhard Jankowsky
Journal:  RNA       Date:  2006-03-23       Impact factor: 4.942

4.  RanGTP-regulated interactions of CRM1 with nucleoporins and a shuttling DEAD-box helicase.

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Journal:  Mol Cell Biol       Date:  1999-09       Impact factor: 4.272

5.  Biochemical and kinetic characterization of the RNA helicase activity of eukaryotic initiation factor 4A.

Authors:  G W Rogers; N J Richter; W C Merrick
Journal:  J Biol Chem       Date:  1999-04-30       Impact factor: 5.157

6.  Hepatitis C virus core protein binds to a DEAD box RNA helicase.

Authors:  N Mamiya; H J Worman
Journal:  J Biol Chem       Date:  1999-05-28       Impact factor: 5.157

7.  Cytokinesis is not controlled by calmodulin or myosin light chain kinase in the Caenorhabditis elegans early embryo.

Authors:  Ellen L Batchelder; Christina L Thomas-Virnig; Jeffery D Hardin; John G White
Journal:  FEBS Lett       Date:  2007-08-14       Impact factor: 4.124

8.  Belle is a Drosophila DEAD-box protein required for viability and in the germ line.

Authors:  Oona Johnstone; Renate Deuring; Ronald Bock; Patrick Linder; Margaret T Fuller; Paul Lasko
Journal:  Dev Biol       Date:  2005-01-01       Impact factor: 3.582

9.  The DEAD box RNA helicase VBH-1 is required for germ cell function in C. elegans.

Authors:  L Silvia Salinas; Ernesto Maldonado; Marina Macías-Silva; T Keith Blackwell; Rosa E Navarro
Journal:  Genesis       Date:  2007-09       Impact factor: 2.487

Review 10.  Somatic sex determination.

Authors:  David Zarkower
Journal:  WormBook       Date:  2006-02-10
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  13 in total

1.  Somatic sex determination in Caenorhabditis elegans is modulated by SUP-26 repression of tra-2 translation.

Authors:  James Mapes; Jeng-Ting Chen; Jau-Song Yu; Ding Xue
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

2.  Bioinformatic analysis of P granule-related proteins: insights into germ granule evolution in nematodes.

Authors:  Luis A Bezares-Calderón; Arturo Becerra; Laura S Salinas; Ernesto Maldonado; Rosa E Navarro
Journal:  Dev Genes Evol       Date:  2010-06-08       Impact factor: 0.900

Review 3.  P granule assembly and function in Caenorhabditis elegans germ cells.

Authors:  Dustin Updike; Susan Strome
Journal:  J Androl       Date:  2009-10-29

4.  The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics.

Authors:  Shana Elbaum-Garfinkle; Younghoon Kim; Krzysztof Szczepaniak; Carlos Chih-Hsiung Chen; Christian R Eckmann; Sua Myong; Clifford P Brangwynne
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-26       Impact factor: 11.205

5.  Identifying sequence perturbations to an intrinsically disordered protein that determine its phase-separation behavior.

Authors:  Benjamin S Schuster; Gregory L Dignon; Wai Shing Tang; Fleurie M Kelley; Aishwarya Kanchi Ranganath; Craig N Jahnke; Alison G Simpkins; Roshan Mammen Regy; Daniel A Hammer; Matthew C Good; Jeetain Mittal
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-11       Impact factor: 11.205

6.  The zebrafish maternal-effect gene mission impossible encodes the DEAH-box helicase Dhx16 and is essential for the expression of downstream endodermal genes.

Authors:  Emily Putiri; Francisco Pelegri
Journal:  Dev Biol       Date:  2011-03-21       Impact factor: 3.582

Review 7.  Germ granules and gene regulation in the Caenorhabditis elegans germline.

Authors:  Carolyn M Phillips; Dustin L Updike
Journal:  Genetics       Date:  2022-03-03       Impact factor: 4.402

Review 8.  Sex Determination in Nematode Germ Cells.

Authors:  Ronald E Ellis
Journal:  Sex Dev       Date:  2022-02-16       Impact factor: 1.943

9.  The DEAD Box RNA helicase VBH-1 is a new player in the stress response in C. elegans.

Authors:  Daniel Paz-Gómez; Emmanuel Villanueva-Chimal; Rosa E Navarro
Journal:  PLoS One       Date:  2014-05-20       Impact factor: 3.240

10.  RNAi Screen Identifies Novel Regulators of RNP Granules in the Caenorhabditis elegans Germ Line.

Authors:  Megan P Wood; Angela Hollis; Ashley L Severance; Megan L Karrick; Jennifer A Schisa
Journal:  G3 (Bethesda)       Date:  2016-08-09       Impact factor: 3.154

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