Literature DB >> 19360150

Cancer biomarker discovery and development in gastrointestinal cancers: early detection research network-a collaborative approach.

Sudhir Srivastava1.   

Abstract

Despite the large amount of research and reporting on potential biomarkers in cancer, very few markers have been brought to use in the clinic. Disorganization plays a large part in this low yield. The Early Detection Research Network (EDRN) of the National Cancer Institute has been initiated to foster collaboration among independent institutions/ laboratories to facilitate, standardize, and centralize discovery and validation of candidate biomarkers. EDRN comprises four components: biomarker reference laboratories; biomarker developmental laboratories; clinical epidemiology and validation centers; and a data management and coordinating center. Biomarker validation proceeds through five phases-the preclinical exploratory, clinical assay and validation, retrospective longitudinal, prospective screening, and cancer control phases. A number of candidate markers in colon cancer, esophageal adenocarcinoma, and hepatocellular carcinoma (HCC) currently are moving through the developmental process. Ongoing EDRN collaborations assessing the potential utility of des-gamma carboxyprothrombin (DCP) in discriminating early HCC in patients with cirrhosis and the ability of DNA methylation analysis to predict progression from Barrett's esophagus to esophageal cancer are summarized. EDRN welcomes collaboration in biomarker validation and assembly of sample reference libraries.

Entities:  

Year:  2007        PMID: 19360150      PMCID: PMC2666843     

Source DB:  PubMed          Journal:  Gastrointest Cancer Res        ISSN: 1934-7820


  10 in total

Review 1.  Phases of biomarker development for early detection of cancer.

Authors:  M S Pepe; R Etzioni; Z Feng; J D Potter; M L Thompson; M Thornquist; M Winget; Y Yasui
Journal:  J Natl Cancer Inst       Date:  2001-07-18       Impact factor: 13.506

Review 2.  Biomarkers in cancer staging, prognosis and treatment selection.

Authors:  Joseph A Ludwig; John N Weinstein
Journal:  Nat Rev Cancer       Date:  2005-11       Impact factor: 60.716

3.  GP73, a resident Golgi glycoprotein, is a novel serum marker for hepatocellular carcinoma.

Authors:  Jorge A Marrero; Patrick R Romano; Olga Nikolaeva; Laura Steel; Anand Mehta; Claus J Fimmel; Mary Ann Comunale; Anthony D'Amelio; Anna S Lok; Timothy M Block
Journal:  J Hepatol       Date:  2005-06-28       Impact factor: 25.083

4.  Inactivation of p16, RUNX3, and HPP1 occurs early in Barrett's-associated neoplastic progression and predicts progression risk.

Authors:  Karsten Schulmann; Anca Sterian; Agnes Berki; Jing Yin; Fumiaki Sato; Yan Xu; Andreea Olaru; Suna Wang; Yuriko Mori; Elena Deacu; James Hamilton; Takatsugu Kan; Mark J Krasna; David G Beer; Margaret S Pepe; John M Abraham; Ziding Feng; Wolff Schmiegel; Bruce D Greenwald; Stephen J Meltzer
Journal:  Oncogene       Date:  2005-06-09       Impact factor: 9.867

5.  Promoter methylation and response to chemotherapy and radiation in esophageal cancer.

Authors:  James P Hamilton; Fumiaki Sato; Bruce D Greenwald; Mohan Suntharalingam; Mark J Krasna; Martin J Edelman; Austin Doyle; Agnes T Berki; John M Abraham; Yuriko Mori; Takatsugu Kan; Carmit Mantzur; Bogdan Paun; Suna Wang; Tetsuo Ito; Zhe Jin; Stephen J Meltzer
Journal:  Clin Gastroenterol Hepatol       Date:  2006-05-04       Impact factor: 11.382

6.  Des-gamma carboxyprothrombin can differentiate hepatocellular carcinoma from nonmalignant chronic liver disease in american patients.

Authors:  Jorge A Marrero; Grace L Su; Wei Wei; Dawn Emick; Hari S Conjeevaram; Robert J Fontana; Anna S Lok
Journal:  Hepatology       Date:  2003-05       Impact factor: 17.425

7.  Use of targeted glycoproteomics to identify serum glycoproteins that correlate with liver cancer in woodchucks and humans.

Authors:  Timothy M Block; Mary Ann Comunale; Melissa Lowman; Laura F Steel; Patrick R Romano; Claus Fimmel; Bud C Tennant; W Thomas London; Alison A Evans; Baruch S Blumberg; Raymond A Dwek; Tajinder S Mattu; Anand S Mehta
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-10       Impact factor: 11.205

8.  Four-dimensional elastic light-scattering fingerprints as preneoplastic markers in the rat model of colon carcinogenesis.

Authors:  Hemant K Roy; Yang Liu; Ramesh K Wali; Young L Kim; Alexei K Kromine; Michael J Goldberg; Vadim Backman
Journal:  Gastroenterology       Date:  2004-04       Impact factor: 22.682

9.  Risk stratification of colon carcinogenesis through enhanced backscattering spectroscopy analysis of the uninvolved colonic mucosa.

Authors:  Hemant K Roy; Young L Kim; Yang Liu; Ramesh K Wali; Michael J Goldberg; Vladimir Turzhitsky; Jonathan Horwitz; Vadim Backman
Journal:  Clin Cancer Res       Date:  2006-02-01       Impact factor: 12.531

10.  Risk factors for hepatocellular carcinoma may impair the performance of biomarkers: a comparison of AFP, DCP, and AFP-L3.

Authors:  Michael L Volk; Jose C Hernandez; Grace L Su; Anna S Lok; Jorge A Marrero
Journal:  Cancer Biomark       Date:  2007       Impact factor: 4.388

  10 in total
  10 in total

1.  Biomarkers in Barrett's Esophagus.

Authors:  Rhonda F Souza
Journal:  Tech Gastrointest Endosc       Date:  2010-04

2.  NID2 and HOXA9 promoter hypermethylation as biomarkers for prevention and early detection in oral cavity squamous cell carcinoma tissues and saliva.

Authors:  R Guerrero-Preston; E Soudry; J Acero; M Orera; L Moreno-López; G Macía-Colón; A Jaffe; M Berdasco; C Ili-Gangas; P Brebi-Mieville; Y Fu; C Engstrom; R A Irizarry; M Esteller; W Westra; W Koch; J Califano; D Sidransky
Journal:  Cancer Prev Res (Phila)       Date:  2011-05-10

3.  The MethDet: a technology for biomarker development.

Authors:  Victor V Levenson; Anatoliy A Melnikov
Journal:  Expert Rev Mol Diagn       Date:  2011-11       Impact factor: 5.225

Review 4.  Systematic, evidence-based discovery of biomarkers at the NCI.

Authors:  John R Prensner; Arul M Chinnaiyan; Sudhir Srivastava
Journal:  Clin Exp Metastasis       Date:  2012-08-07       Impact factor: 5.150

5.  Analysis of MicroRNAs in sputum to improve computed tomography for lung cancer diagnosis.

Authors:  Jun Shen; Jipei Liao; Maria A Guarnera; HongBin Fang; Ling Cai; Sanford A Stass; Feng Jiang
Journal:  J Thorac Oncol       Date:  2014-01       Impact factor: 15.609

Review 6.  Glioblastoma extracellular vesicles: reservoirs of potential biomarkers.

Authors:  Jasmina S Redzic; Timothy H Ung; Michael W Graner
Journal:  Pharmgenomics Pers Med       Date:  2014-02-13

7.  Methylated DNA as Promising Marker for Early Diagnosis of Cancer.

Authors:  Hafiz Ahmed
Journal:  J Bioanal Biomed       Date:  2012-10-29

Review 8.  MicroRNA signatures as biomarkers and therapeutic target for CNS embryonal tumors: the pros and the cons.

Authors:  Tarek Shalaby; Giulio Fiaschetti; Martin Baumgartner; Michael A Grotzer
Journal:  Int J Mol Sci       Date:  2014-11-24       Impact factor: 5.923

Review 9.  The Role of Circulating Free DNA and MicroRNA in Non-Invasive Diagnosis of HBV- and HCV-Related Hepatocellular Carcinoma.

Authors:  Francesca Pezzuto; Luigi Buonaguro; Franco Maria Buonaguro; Maria Lina Tornesello
Journal:  Int J Mol Sci       Date:  2018-03-28       Impact factor: 5.923

Review 10.  Circulating Cell-Free DNA-Based Methylation Pattern in Saliva for Early Diagnosis of Head and Neck Cancer.

Authors:  Natalia Birknerova; Veronika Mancikova; Evan David Paul; Jan Matyasovsky; Pavol Cekan; Vladimir Palicka; Helena Parova
Journal:  Cancers (Basel)       Date:  2022-10-06       Impact factor: 6.575

  10 in total

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