Literature DB >> 19353278

Mitochondrial genome sequence of Unionicola foili (Acari: Unionicolidae): a unique gene order with implications for phylogenetic inference.

Brian R Ernsting1, Dale D Edwards, Katie J Aldred, Jeffrey S Fites, Caroline R Neff.   

Abstract

The mitochondrial genome of Unionicola foili is circular, 14,738 bp in length, and contains several notable features. The sequence and annotation revealed a unique gene order, continuing a pattern of highly rearranged mitochondrial genomes in the Trombidiformes. U. foili mitochondrial tRNA sequences predict non-canonical secondary structures for these molecules, and our annotation suggests an in-frame fusion between the nad4L and nad5 genes in this genome. The unique gene order and unusual tRNA structures could serve as idiosyncratic characters and have the potential to be phylogenetically informative.

Entities:  

Mesh:

Year:  2009        PMID: 19353278     DOI: 10.1007/s10493-009-9263-1

Source DB:  PubMed          Journal:  Exp Appl Acarol        ISSN: 0168-8162            Impact factor:   2.132


  40 in total

Review 1.  Parasite histories and novel phylogenetic tools: alternative approaches to inferring parasite evolution from molecular markers.

Authors:  Václav Hypsa
Journal:  Int J Parasitol       Date:  2005-11-28       Impact factor: 3.981

2.  The use of genome-level characters for phylogenetic reconstruction.

Authors:  Jeffrey L Boore
Journal:  Trends Ecol Evol       Date:  2006-06-08       Impact factor: 17.712

Review 3.  Mitochondrial genomes of parasitic arthropods: implications for studies of population genetics and evolution.

Authors:  R Shao; S C Barker
Journal:  Parasitology       Date:  2006-10-11       Impact factor: 3.234

4.  The mitochondrial genome of the predatory mite Metaseiulus occidentalis (Arthropoda: Chelicerata: Acari: Phytoseiidae) is unexpectedly large and contains several novel features.

Authors:  Ayyamperumal Jeyaprakash; Marjorie A Hoy
Journal:  Gene       Date:  2007-01-27       Impact factor: 3.688

5.  RNA editing in Drosophila melanogaster: New targets and functional consequences.

Authors:  Mark Stapleton; Joseph W Carlson; Susan E Celniker
Journal:  RNA       Date:  2006-10-03       Impact factor: 4.942

6.  Bizarre tRNAs inferred from DNA sequences of mitochondrial genomes of nematode worms.

Authors:  D R Wolstenholme; J L Macfarlane; R Okimoto; D O Clary; J A Wahleithner
Journal:  Proc Natl Acad Sci U S A       Date:  1987-03       Impact factor: 11.205

7.  Six unidentified reading frames of human mitochondrial DNA encode components of the respiratory-chain NADH dehydrogenase.

Authors:  A Chomyn; P Mariottini; M W Cleeter; C I Ragan; A Matsuno-Yagi; Y Hatefi; R F Doolittle; G Attardi
Journal:  Nature       Date:  1985 Apr 18-24       Impact factor: 49.962

8.  The mitochondrial sequences of Heptathela hangzhouensis and Ornithoctonus huwena reveal unique gene arrangements and atypical tRNAs.

Authors:  Yang Qiu; Daxiang Song; Kaiya Zhou; Hongying Sun
Journal:  J Mol Evol       Date:  2005-01       Impact factor: 2.395

9.  The mitochondrial genomes of soft ticks have an arrangement of genes that has remained unchanged for over 400 million years.

Authors:  R Shao; Y Aoki; H Mitani; N Tabuchi; S C Barker; M Fukunaga
Journal:  Insect Mol Biol       Date:  2004-06       Impact factor: 3.585

10.  Alternative mRNA editing in trypanosomes is extensive and may contribute to mitochondrial protein diversity.

Authors:  Torsten Ochsenreiter; Michael Cipriano; Stephen L Hajduk
Journal:  PLoS One       Date:  2008-02-13       Impact factor: 3.240

View more
  12 in total

1.  Nucleotide composition of CO1 sequences in Chelicerata (Arthropoda): detecting new mitogenomic rearrangements.

Authors:  Juliette Arabi; Mark L I Judson; Louis Deharveng; Wilson R Lourenço; Corinne Cruaud; Alexandre Hassanin
Journal:  J Mol Evol       Date:  2012-02-24       Impact factor: 2.395

2.  Minimal barcode distance between two water mite species from Madeira Island: a cautionary tale.

Authors:  Ricardo García-Jiménez; Jose Luis Horreo; Antonio G Valdecasas
Journal:  Exp Appl Acarol       Date:  2017-06-16       Impact factor: 2.132

3.  Mitochondrial genome sequence of Unionicola parkeri (Acari: Trombidiformes: Unionicolidae): molecular synapomorphies between closely-related Unionicola gill mites.

Authors:  Dale D Edwards; Lesley E Jackson; Amy J Johnson; Brian R Ernsting
Journal:  Exp Appl Acarol       Date:  2011-02-25       Impact factor: 2.132

4.  The complete mitochondrial genome of the brown leg mite, Aleuroglyphus ovatus (Acari: Sarcoptiformes): evaluation of largest non-coding region and unique tRNAs.

Authors:  En-Tao Sun; Chao-Pin Li; Liu-Wang Nie; Yu-Xin Jiang
Journal:  Exp Appl Acarol       Date:  2014-04-29       Impact factor: 2.132

5.  The complete mitochondrial genome of the citrus red mite Panonychus citri (Acari: Tetranychidae): high genome rearrangement and extremely truncated tRNAs.

Authors:  Ming-Long Yuan; Dan-Dan Wei; Bao-Jun Wang; Wei Dou; Jin-Jun Wang
Journal:  BMC Genomics       Date:  2010-10-23       Impact factor: 3.969

6.  Pseudoscorpion mitochondria show rearranged genes and genome-wide reductions of RNA gene sizes and inferred structures, yet typical nucleotide composition bias.

Authors:  Sergey Ovchinnikov; Susan E Masta
Journal:  BMC Evol Biol       Date:  2012-03-12       Impact factor: 3.260

7.  Complete mitochondrial genomes of the human follicle mites Demodex brevis and D. folliculorum: novel gene arrangement, truncated tRNA genes, and ancient divergence between species.

Authors:  Michael F Palopoli; Samuel Minot; Dorothy Pei; Alicia Satterly; Julie Endrizzi
Journal:  BMC Genomics       Date:  2014-12-16       Impact factor: 3.969

8.  Complete mitochondrial genomes of Carcinoscorpius rotundicauda and Tachypleus tridentatus (Xiphosura, Arthropoda) and implications for chelicerate phylogenetic studies.

Authors:  Su Youn Baek; Eun Hwa Choi; Kuem Hee Jang; Shi Hyun Ryu; Sang Myeon Park; Ho Young Suk; Cheon Young Chang; Ui Wook Hwang
Journal:  Int J Biol Sci       Date:  2014-04-16       Impact factor: 6.580

9.  Improved tRNA prediction in the American house dust mite reveals widespread occurrence of extremely short minimal tRNAs in acariform mites.

Authors:  Pavel B Klimov; Barry M Oconnor
Journal:  BMC Genomics       Date:  2009-12-11       Impact factor: 3.969

10.  Can long-range PCR be used to amplify genetically divergent mitochondrial genomes for comparative phylogenetics? A case study within spiders (Arthropoda: Araneae).

Authors:  Andrew G Briscoe; Sara Goodacre; Susan E Masta; Martin I Taylor; Miquel A Arnedo; David Penney; John Kenny; Simon Creer
Journal:  PLoS One       Date:  2013-05-08       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.