Literature DB >> 19349251

Multiscale modeling in rodent ventricular myocytes.

Shaoying Lu1, Anushka Michailova, Jeffrey Saucerman, Yuhui Cheng, Zeyun Yu, Timothy Kaiser, Wilfred Li, Randolph Bank, Michael Holst, J McCammon, Takeharu Hayashi, Masahiko Hoshijima, Peter Arzberger, Andrew McCulloch.   

Abstract

There is a growing body of experimental evidence suggesting that the Ca(2+) signaling in ventricular myocytes is characterized by a high gradient near the cell membrane and a more uniform Ca(2+) distribution in the cell interior [1]--[7]. An important reason for this phenomenon might be that in these cells the t-tubular system forms a network of extracellular space, extending deep into the cell interior. This allows the electrical signal, that propagates rapidly along the cell membrane, to reach the vicinity of the sarcoplasmic reticulum (SR), where intracellular Ca(2+) required for myofilament activation is stored [1], [8]--[11]. Early studies of cardiac muscle showed that the t-tubules are found at intervals of about 2 lm along the longitudinal cell axis in close proximity to the Z-disks of the sarcomeres [12]. Subsequent studies have demonstrated that the t-tubular system has also longitudinal extensions [9]--[11], [13].

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Year:  2009        PMID: 19349251      PMCID: PMC3197248          DOI: 10.1109/MEMB.2009.931787

Source DB:  PubMed          Journal:  IEEE Eng Med Biol Mag        ISSN: 0739-5175


  32 in total

1.  Ca(2+) Sparks in Cardiac Muscle: Is There Life Without Them?

Authors:  Ernst Niggli
Journal:  News Physiol Sci       Date:  1999-08

2.  Termination of cardiac Ca(2+) sparks: an investigative mathematical model of calcium-induced calcium release.

Authors:  Eric A Sobie; Keith W Dilly; Jader dos Santos Cruz; W Jonathan Lederer; M Saleet Jafri
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

3.  Na+-Ca2+ exchange activity is localized in the T-tubules of rat ventricular myocytes.

Authors:  Z Yang; C Pascarel; D S Steele; K Komukai; F Brette; C H Orchard
Journal:  Circ Res       Date:  2002-08-23       Impact factor: 17.367

Review 4.  T-tubule function in mammalian cardiac myocytes.

Authors:  Fabien Brette; Clive Orchard
Journal:  Circ Res       Date:  2003-06-13       Impact factor: 17.367

5.  Immunofluorescence localization of the Na-Ca exchanger in heart cells.

Authors:  R S Kieval; R J Bloch; G E Lindenmayer; A Ambesi; W J Lederer
Journal:  Am J Physiol       Date:  1992-08

6.  Interplay of ryanodine receptor distribution and calcium dynamics.

Authors:  Leighton T Izu; Shawn A Means; John N Shadid; Ye Chen-Izu; C William Balke
Journal:  Biophys J       Date:  2006-04-07       Impact factor: 4.033

7.  Sub-micrometer anatomical models of the sarcolemma of cardiac myocytes based on confocal imaging.

Authors:  Frank B Sachse; Eleonora Savio-Galimberti; Joshua I Goldhaber; John H B Bridge
Journal:  Pac Symp Biocomput       Date:  2008

8.  Caveolin-3 is adjacent to a group of extradyadic ryanodine receptors.

Authors:  David R L Scriven; Agnieszka Klimek; Parisa Asghari; Karl Bellve; Edwin D W Moore
Journal:  Biophys J       Date:  2005-06-24       Impact factor: 4.033

9.  Localization and function of the Na+/Ca2+-exchanger in normal and detubulated rat cardiomyocytes.

Authors:  Marion J Thomas; Ivar Sjaastad; Kathrine Andersen; P Johannes Helm; J Andrew Wasserstrom; Ole M Sejersted; Ole Petter Ottersen
Journal:  J Mol Cell Cardiol       Date:  2003-11       Impact factor: 5.000

10.  Spatiotemporal features of Ca2+ buffering and diffusion in atrial cardiac myocytes with inhibited sarcoplasmic reticulum.

Authors:  Anushka Michailova; Franco DelPrincipe; Marcel Egger; Ernst Niggli
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

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  12 in total

1.  Multiscale modeling of calcium dynamics in ventricular myocytes with realistic transverse tubules.

Authors:  Zeyun Yu; Guangming Yao; Masahiko Hoshijima; Anushka Michailova; Michael Holst
Journal:  IEEE Trans Biomed Eng       Date:  2011-05-31       Impact factor: 4.538

2.  A localized meshless approach for modeling spatial-temporal calcium dynamics in ventricular myocytes.

Authors:  Guangming Yao; Zeyun Yu
Journal:  Int J Numer Method Biomed Eng       Date:  2012-02       Impact factor: 2.747

3.  Hybrid finite element and Brownian dynamics method for diffusion-controlled reactions.

Authors:  Patricia Bauler; Gary A Huber; J Andrew McCammon
Journal:  J Chem Phys       Date:  2012-04-28       Impact factor: 3.488

4.  Hybrid finite element and Brownian dynamics method for charged particles.

Authors:  Gary A Huber; Yinglong Miao; Shenggao Zhou; Bo Li; J Andrew McCammon
Journal:  J Chem Phys       Date:  2016-04-28       Impact factor: 3.488

5.  New software developments for quality mesh generation and optimization from biomedical imaging data.

Authors:  Zeyun Yu; Jun Wang; Zhanheng Gao; Ming Xu; Masahiko Hoshijima
Journal:  Comput Methods Programs Biomed       Date:  2013-09-04       Impact factor: 5.428

6.  Numerical analysis of the effect of T-tubule location on calcium transient in ventricular myocytes.

Authors:  Uduak Z George; Jun Wang; Zeyun Yu
Journal:  Biomed Mater Eng       Date:  2014       Impact factor: 1.300

7.  Parallel acceleration for modeling of calcium dynamics in cardiac myocytes.

Authors:  Ke Liu; Guangming Yao; Zeyun Yu
Journal:  Biomed Mater Eng       Date:  2014       Impact factor: 1.300

8.  Multi-Scale Continuum Modeling of Biological Processes: From Molecular Electro-Diffusion to Sub-Cellular Signaling Transduction.

Authors:  Y Cheng; P Kekenes-Huskey; Je Hake; Mj Holst; Ja McCammon; Ap Michailova
Journal:  Comput Sci Discov       Date:  2012-03-20

9.  Numerical analysis of Ca2+ signaling in rat ventricular myocytes with realistic transverse-axial tubular geometry and inhibited sarcoplasmic reticulum.

Authors:  Yuhui Cheng; Zeyun Yu; Masahiko Hoshijima; Michael J Holst; Andrew D McCulloch; J Andrew McCammon; Anushka P Michailova
Journal:  PLoS Comput Biol       Date:  2010-10-28       Impact factor: 4.475

10.  Modeling effects of L-type ca(2+) current and na(+)-ca(2+) exchanger on ca(2+) trigger flux in rabbit myocytes with realistic T-tubule geometries.

Authors:  Peter M Kekenes-Huskey; Yuhui Cheng; Johan E Hake; Frank B Sachse; John H Bridge; Michael J Holst; J Andrew McCammon; Andrew D McCulloch; Anushka P Michailova
Journal:  Front Physiol       Date:  2012-09-10       Impact factor: 4.566

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