Literature DB >> 19347568

Simple construction of plant RNAi vectors using long oligonucleotides.

Mieko Higuchi1, Takeshi Yoshizumi, Tomoko Kuriyama, Hiroko Hara, Chika Akagi, Hiroaki Shimada, Minami Matsui.   

Abstract

RNA interference (RNAi) is one of the most important technologies currently available for the analysis of gene function. However, despite the development of various methods, it is still difficult to construct RNAi vectors for plants with the appropriate inverted repeat fragments to produce double-stranded RNA for knockdown experiments. To solve this problem we have developed an easy and simple method to make RNAi constructs using two long oligonucleotides consisting of partially complementary sequences without the need for PCR amplification and multiple cloning steps. CHS RNAi plants generated using this method showed yellow seed color and a decrease in antocyanin content--phenotypes typically observed in CHS loss-of-function mutants. Moreover, we demonstrated specific knockdown of both the PHYA and PHYB genes using a tandem RNAi construct. This method thus represents a powerful tool for gene knockdown in plants.

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Year:  2009        PMID: 19347568     DOI: 10.1007/s10265-009-0228-6

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  15 in total

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Journal:  Plant J       Date:  2001-09       Impact factor: 6.417

2.  Computational estimation and experimental verification of off-target silencing during posttranscriptional gene silencing in plants.

Authors:  Ping Xu; Yuanji Zhang; Li Kang; Marilyn J Roossinck; Kirankumar S Mysore
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3.  Virus resistance and gene silencing in plants can be induced by simultaneous expression of sense and antisense RNA.

Authors:  P M Waterhouse; M W Graham; M B Wang
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-10       Impact factor: 11.205

4.  The fidelity of DNA synthesis catalyzed by derivatives of Escherichia coli DNA polymerase I.

Authors:  K Bebenek; C M Joyce; M P Fitzgerald; T A Kunkel
Journal:  J Biol Chem       Date:  1990-08-15       Impact factor: 5.157

5.  Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.

Authors:  R K Saiki; S Scharf; F Faloona; K B Mullis; G T Horn; H A Erlich; N Arnheim
Journal:  Science       Date:  1985-12-20       Impact factor: 47.728

6.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

7.  Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis.

Authors:  B W Shirley; W L Kubasek; G Storz; E Bruggemann; M Koornneef; F M Ausubel; H M Goodman
Journal:  Plant J       Date:  1995-11       Impact factor: 6.417

8.  Mutations in the gene for the red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development.

Authors:  J W Reed; P Nagpal; D S Poole; M Furuya; J Chory
Journal:  Plant Cell       Date:  1993-02       Impact factor: 11.277

9.  Constructs and methods for high-throughput gene silencing in plants.

Authors:  Chris Helliwell; Peter Waterhouse
Journal:  Methods       Date:  2003-08       Impact factor: 3.608

10.  Phytochrome A null mutants of Arabidopsis display a wild-type phenotype in white light.

Authors:  G C Whitelam; E Johnson; J Peng; P Carol; M L Anderson; J S Cowl; N P Harberd
Journal:  Plant Cell       Date:  1993-07       Impact factor: 11.277

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  4 in total

Review 1.  A shift from cell cultures to creatures: in vivo imaging of small animals in experimental regenerative medicine.

Authors:  Anna J Studwell; Darrell N Kotton
Journal:  Mol Ther       Date:  2011-09-27       Impact factor: 11.454

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Journal:  J Plant Res       Date:  2010-05-28       Impact factor: 2.629

3.  RNAi induced gene silencing in crop improvement.

Authors:  Subodh Kumar Sinha
Journal:  Physiol Mol Biol Plants       Date:  2010-12-07

Review 4.  RNA Interference for Functional Genomics and Improvement of Cotton (Gossypium sp.).

Authors:  Ibrokhim Y Abdurakhmonov; Mirzakamol S Ayubov; Khurshida A Ubaydullaeva; Zabardast T Buriev; Shukhrat E Shermatov; Haydarali S Ruziboev; Umid M Shapulatov; Sukumar Saha; Mauricio Ulloa; John Z Yu; Richard G Percy; Eric J Devor; Govind C Sharma; Venkateswara R Sripathi; Siva P Kumpatla; Alexander van der Krol; Hake D Kater; Khakimdjan Khamidov; Shavkat I Salikhov; Johnie N Jenkins; Abdusattor Abdukarimov; Alan E Pepper
Journal:  Front Plant Sci       Date:  2016-02-22       Impact factor: 5.753

  4 in total

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