| Literature DB >> 19347053 |
Iris Steinbrugger1, Anton Haas, Richard Maier, Wilfried Renner, Monika Mayer, Christoph Werner, Andreas Wedrich, Yosuf El-Shabrawi, Otto Schmut, Martin Weger.
Abstract
PURPOSE: Branch retinal vein occlusion (BRVO) is a common vision-threatening disease. Compression of the underlying retinal vein due to increased rigidity of the crossing artery has been implicated in the pathogenesis of BRVO. Among others, arterial hypertension and hypercholesterolemia, both of which contribute to atherogenesis, have been identified as risk factors. Atherosclerosis itself is a chronic low-grade inflammatory disease with a distinct pro-inflammatory cytokine pattern. In addition to their role in atherogenesis, some cytokines have been shown to exert procoagulatory effects, and may thus contribute to the development of BRVO by a second mechanism. Gene polymorphisms affecting the expression of inflammation-related cytokines are therefore candidates as potential risk factors for BRVO. The purpose of the present study was to investigate hypothesized associations between cytokine gene polymorphisms and the presence of BRVO.Entities:
Mesh:
Year: 2009 PMID: 19347053 PMCID: PMC2664846
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Sequences of primers and probes for TaqMan genotyping assays.
| forward primer | GAGGCTCCTGCAATTGACAGA | |
| reverse primer | TCTCTACCTTGGGTGCTGTTCT | |
| C probe | VIC-CTGCCTCGGGAGCT-NFQ | |
| T probe | FAM-CTGCCTCAGGAGCT-NFQ | |
| forward primer | CCGGTGAGCCCTAAGTCTAAGATAG | |
| reverse primer | GCCCTTCAGACCTCATTTTGACA | |
| T probe | VIC-AAAATGGACCTGATGCTAT-NFQ | |
| C probe | FAM-AATGGACCTGGTGCTAT-NFQ | |
| forward primer | GACCTGTCCTTCTCAAAACACCTAA | |
| reverse primer | GGCAGAATAACAGGCAGACTCT | |
| C probe | VIC-CATTGTCCCCCAGTGCT-NFQ | |
| T probe | FAM-CATTGTTCCCCAGTGCT-NFQ | |
| forward primer | GACGACCTAAGCTGCACTTTTC | |
| reverse primer | GGGCTGATTGGAAACCTTATTAAGATTG | |
| G probe | VIC-CCTTTAGCATCGCAAGAC-NFQ | |
| C probe | FAM-CTTTAGCATGGCAAGAC-NFQ | |
| forward primer | GGTAAAGGAGCCTGGAACACATC | |
| reverse primer | GCCCTTCCATTTTACTTTCCAGAGA | |
| C probe | VIC-CCCGCCTGTCCTGTAG-NFQ | |
| A probe | FAM-CCGCCTGTACTGTAG-NFQ | |
| forward primer | AGCTGAGTGTAGTGACGCATG | |
| reverse primer | CTCCTGCCTCAGCCTCTTG | |
| A probe | VIC-CCTCAATCCCAGCTACT-NFQ | |
| G probe | FAM-CTCAATCCCGGCTACT-NFQ | |
| forward primer | CCAAAAGAAATGGAGGCAATAGGTT | |
| reverse primer | GGACCCTGGAGGCTGAAC | |
| G probe | VIC-CCCGTCCCCATGCC-NFQ | |
| A probe | FAM-CCCGTCCTCATGCC-NFQ | |
| forward primer | GGAGGGCATCTTTTCTTGACAGA | |
| reverse primer | GGAAGGTGAAGGGTATGAATCAGAA | |
| A probe | VIC-CAGACAGCTATCACTTT-NFQ | |
| G probe | FAM-AGACAGCTGTCACTTT-NFQ | |
| Assay-on-demand (C__11748116_10) | Predesigned assay from Applied Biosystems; primer and probe sequences not available. | |
| forward primer | ACTGAGTCTTCAAAGTTCCTGCTT | |
| reverse primer | GAGGACCCTCCTCAATAAAACACTTTATAAAT | |
| G probe | VIC-CATTACAGATCTTACCTCCTTT-NFQ | |
| A probe | FAM-CATTACAGATCTTATCTCCTTT-NFQ |
Sequences of primers and probes for TaqMan genotyping assays are presented. FAM and VIC are names of fluorescent dyes. NFQ is the abbreviation for non-fluorescent quencher.
Demographic data of patients with branch retinal vein occlusion and control subjects.
| Females | 228 (57.3%) | 206 (58.0%) | 0.84 |
| Mean age (years±SD) | 67.1±11.0 | 68.3±13.8 | 0.18 |
| Arterial hypertension | 306 (76.9%) | 183 (51.5%) | <0.001 |
| Diabetes mellitus | 27 (6.8%) | 24 (6.8%) | 0.99 |
| Hypercholesterolemia | 310 (77.9%) | 260 (73.2%) | 0.14 |
| Ever-smoker | 119 (29.9%) | 90 (25.4%) | 0.16 |
Prevalence of arterial hypertension was significantly higher in branch retinal vein occlusion (BRVO) patients compared to control subjects. Data are mean±standard deviation, or number of subjects (%).
Genotype and allele frequencies in patients with branch retinal vein occlusion and control subjects.
| CC | 183 (46.0%) | 162 (45.6%) | 0.68 | |
| CT | 184 (46.2%) | 159 (44.8%) | ||
| TT | 31 (7.8%) | 34 (9.6%) | ||
| T allele frequency | 0.309 | 0.32 | 0.66 | |
| TT | 140 (35.2%) | 145 (40.8%) | 0.15 | |
| TC | 210 (52.8%) | 162 (45.6%) | ||
| CC | 48 (12.1%) | 48 (13.5%) | ||
| C allele frequency | 0.384 | 0.363 | 0.4 | |
| CC | 287 (72.1%) | 253 (71.3%) | 0.58 | |
| CT | 106 (26.6%) | 94 (26.5%) | ||
| TT | 5 (1.3%) | 8 (2.3%) | ||
| T allele frequency | 0.146 | 0.155 | 0.62 | |
| GG | 130 (32.7%) | 115 (32.4%) | 0.97 | |
| GC | 197 (49.5%) | 174 (49.0%) | ||
| CC | 71 (17.8%) | 66 (18.6%) | ||
| C allele frequency | 0.426 | 0.431 | 0.84 | |
| CC | 216 (54.3%) | 186 (52.4%) | 0.14 | |
| CA | 161 (40.5%) | 137 (38.6%) | ||
| AA | 21 (5.3%) | 32 (9.0%) | ||
| A allele frequency | 0.255 | 0.283 | 0.22 | |
| AA | 232 (58.3%) | 204 (57.5%) | 0.11 | |
| AG | 154 (38.7%) | 129 (36.3%) | ||
| GG | 12 (3.0%) | 22 (6.2%) | ||
| G allele frequency | 0.224 | 0.244 | 0.36 | |
| GG | 277 (69.6%) | 251 (70.7%) | 0.95 | |
| GA | 115 (28.9%) | 99 (27.9%) | ||
| AA | 6 (1.5%) | 5 (1.4%) | ||
| A allele frequency | 0.16 | 0.154 | 0.75 | |
| AA | 225 (56.5%) | 206 (58.0%) | 0.48 | |
| AG | 147 (36.9%) | 133 (37.5%) | ||
| GG | 26 (6.5%) | 16 (4.5%) | ||
| G allele frequency | 0.25 | 0.232 | 0.43 | |
| AA | 76 (19.1%) | 82 (23.1%) | 0.23 | |
| AT | 215 (54.0%) | 171 (48.2%) | ||
| TT | 107 (26.9%) | 102 (28.7%) | ||
| T allele frequency | 0.539 | 0.528 | 0.68 | |
| GG | 272 (68.3%) | 235 (66.2%) | 0.63 | |
| GA | 113 (28.4%) | 104 (29.3%) | ||
| AA | 13 (3.3%) | 16 (4.5%) | ||
| A allele frequency | 0.175 | 0.192 | 0.4 |
Genotype and allele frequencies were not significantly different between branch retinal vein occlusion (BRVO) patients and control subjects, suggesting that these genotypes are not associated with BRVO risk.
Logistic regression analysis of branch retinal vein occlusion risk.
| Arterial hypertension | 3.33 | 2.42–4.57 | <0.001 |
| 0.95 | 0.75–1.20 | 0.67 | |
| 1.18 | 0.94–1.49 | 0.15 | |
| 0.87 | 0.64–1.18 | 0.37 | |
| 0.98 | 0.79–1.22 | 0.87 | |
| 0.83 | 0.65–1.05 | 0.12 | |
| 0.89 | 0.69–1.16 | 0.39 | |
| 1 | 0.74–1.36 | 0.98 | |
| 1.15 | 0.90–1.48 | 0.27 | |
| 1.06 | 0.85–1.31 | 0.61 | |
| 0.86 | 0.66–1.13 | 0.28 |
Arterial hypertension, but none of the investigated gene polymorphisms, was significantly associated with branch retinal vein occlusion (BRVO) risk.