Literature DB >> 19347036

High-Resolution Models of Motion of Macromolecules in Cell Membranes.

Karin Leiderman1, Stanly Steinberg.   

Abstract

The path of a macromolecule on a cell membrane is modeled by a sum of independent identically distributed random variables. Random variables with simple discrete distribution functions capture some important aspects of the jump or hop diffusion reported from single particle tracking experiments that measure the motion of single molecules on a cell membrane. The detail provided by the distribution function for the random variables is critical for accurate simulations of the motion and interactions of macromolecules on the cell membrane. Additionally, the probability distribution for the random variables is easily estimated from single-particle tracking data. The diffusion constant is given by the second moment of the probability distribution, which agrees with the diffusion constant estimated from the mean-square displacement, and thus represents far less information than the distribution function.

Year:  2008        PMID: 19347036      PMCID: PMC2597861          DOI: 10.1016/j.matcom.2007.03.008

Source DB:  PubMed          Journal:  Math Comput Simul        ISSN: 0378-4754            Impact factor:   2.463


  28 in total

1.  Imaging and tracking of single GFP molecules in solution.

Authors:  U Kubitscheck; O Kückmann; T Kues; R Peters
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

2.  Anomalous diffusion of major histocompatibility complex class I molecules on HeLa cells determined by single particle tracking.

Authors:  P R Smith; I E Morrison; K M Wilson; N Fernández; R J Cherry
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

3.  Lowering the barriers to random walks on the cell surface.

Authors:  Qing Tang; Michael Edidin
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

4.  Confined diffusion without fences of a g-protein-coupled receptor as revealed by single particle tracking.

Authors:  Frédéric Daumas; Nicolas Destainville; Claire Millot; André Lopez; David Dean; Laurence Salomé
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

5.  The motion of a single molecule, the lambda-receptor, in the bacterial outer membrane.

Authors:  Lene Oddershede; Jakob Kisbye Dreyer; Sonia Grego; Stanley Brown; Kirstine Berg-Sørensen
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

6.  Apparent subdiffusion inherent to single particle tracking.

Authors:  Douglas S Martin; Martin B Forstner; Josef A Käs
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

7.  Single-molecule imaging of EGFR signalling on the surface of living cells.

Authors:  Y Sako; S Minoghchi; T Yanagida
Journal:  Nat Cell Biol       Date:  2000-03       Impact factor: 28.824

Review 8.  Paradigm shift of the plasma membrane concept from the two-dimensional continuum fluid to the partitioned fluid: high-speed single-molecule tracking of membrane molecules.

Authors:  Akihiro Kusumi; Chieko Nakada; Ken Ritchie; Kotono Murase; Kenichi Suzuki; Hideji Murakoshi; Rinshi S Kasai; Junko Kondo; Takahiro Fujiwara
Journal:  Annu Rev Biophys Biomol Struct       Date:  2005

9.  Analysis of fluorophore diffusion by continuous distributions of diffusion coefficients: application to photobleaching measurements of multicomponent and anomalous diffusion.

Authors:  N Periasamy; A S Verkman
Journal:  Biophys J       Date:  1998-07       Impact factor: 4.033

Review 10.  Single-particle tracking: applications to membrane dynamics.

Authors:  M J Saxton; K Jacobson
Journal:  Annu Rev Biophys Biomol Struct       Date:  1997
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