Literature DB >> 19340263

Bronnikov-aided correction for x-ray computed tomography.

Yoni De Witte1, Matthieu Boone, Jelle Vlassenbroeck, Manuel Dierick, Luc Van Hoorebeke.   

Abstract

When a very-low-absorbing sample is scanned at an x-ray computed tomography setup with a microfocus x-ray tube and a high-resolution detector, the obtained projection images contain not only absorption contrast but also phase contrast. While images without a phase signal can be reconstructed very well, such mixed phase and absorption images give rise to severe artifacts in the reconstructed slices. A method is described that applies a correction to these mixed projections to remove the phase signal. These corrected images can then be processed using a standard filtered backprojection algorithm to obtain reconstructions with only few or no phase artifacts. This new method, which we call the Bronnikov-aided correction (BAC), can be used in a broad variety of applications and without much additional effort. It is tested on a biological and a pharmaceutical sample, and results are evaluated and discussed by comparing them with those of conventional reconstruction methods.

Year:  2009        PMID: 19340263     DOI: 10.1364/josaa.26.000890

Source DB:  PubMed          Journal:  J Opt Soc Am A Opt Image Sci Vis        ISSN: 1084-7529            Impact factor:   2.129


  15 in total

1.  Apparent Linear Attenuation Coefficients in Phase Contrast X-Ray Tomography.

Authors:  Aimin Yan; Xizeng Wu
Journal:  Nucl Instrum Methods Phys Res B       Date:  2011-08-15       Impact factor: 1.377

2.  Optogenetic stimulation of the auditory pathway.

Authors:  Victor H Hernandez; Anna Gehrt; Kirsten Reuter; Zhizi Jing; Marcus Jeschke; Alejandro Mendoza Schulz; Gerhard Hoch; Matthias Bartels; Gerhard Vogt; Carolyn W Garnham; Hiromu Yawo; Yugo Fukazawa; George J Augustine; Ernst Bamberg; Sebastian Kügler; Tim Salditt; Livia de Hoz; Nicola Strenzke; Tobias Moser
Journal:  J Clin Invest       Date:  2014-02-10       Impact factor: 14.808

3.  Polyglycolic acid-polylactic acid scaffold response to different progenitor cell in vitro cultures: a demonstrative and comparative X-ray synchrotron radiation phase-contrast microtomography study.

Authors:  Alessandra Giuliani; Francesca Moroncini; Serena Mazzoni; Marzia Laura Chiara Belicchi; Chiara Villa; Silvia Erratico; Elena Colombo; Francesca Calcaterra; Lucia Brambilla; Yvan Torrente; Gianni Albertini; Silvia Della Bella
Journal:  Tissue Eng Part C Methods       Date:  2013-09-05       Impact factor: 3.056

4.  Modelling fungal colonies and communities: challenges and opportunities.

Authors:  Ruth E Falconer; James L Bown; Eilidh McAdam; Paco Perez-Reche; Adam T Sampson; Jan van den Bulcke; Nia A White
Journal:  IMA Fungus       Date:  2010-11-18       Impact factor: 3.515

Review 5.  In-Line Phase-Contrast X-ray Imaging and Tomography for Materials Science.

Authors:  Sheridan C Mayo; Andrew W Stevenson; Stephen W Wilkins
Journal:  Materials (Basel)       Date:  2012-05-24       Impact factor: 3.623

6.  Three-dimensional mouse brain cytoarchitecture revealed by laboratory-based x-ray phase-contrast tomography.

Authors:  Mareike Töpperwien; Martin Krenkel; Daniel Vincenz; Franziska Stöber; Anja M Oelschlegel; Jürgen Goldschmidt; Tim Salditt
Journal:  Sci Rep       Date:  2017-02-27       Impact factor: 4.379

7.  Propagation-based phase-contrast x-ray tomography of cochlea using a compact synchrotron source.

Authors:  Mareike Töpperwien; Regine Gradl; Daniel Keppeler; Malte Vassholz; Alexander Meyer; Roland Hessler; Klaus Achterhold; Bernhard Gleich; Martin Dierolf; Franz Pfeiffer; Tobias Moser; Tim Salditt
Journal:  Sci Rep       Date:  2018-03-21       Impact factor: 4.379

8.  A phase-retrieval toolbox for X-ray holography and tomography.

Authors:  Leon M Lohse; Anna Lena Robisch; Mareike Töpperwien; Simon Maretzke; Martin Krenkel; Johannes Hagemann; Tim Salditt
Journal:  J Synchrotron Radiat       Date:  2020-04-14       Impact factor: 2.616

Review 9.  X-ray computed tomography and its potential in ecological research: A review of studies and optimization of specimen preparation.

Authors:  Yeisson Gutiérrez; David Ott; Mareike Töpperwien; Tim Salditt; Christoph Scherber
Journal:  Ecol Evol       Date:  2018-07-06       Impact factor: 2.912

10.  Three-dimensional virtual histology of human cerebellum by X-ray phase-contrast tomography.

Authors:  Mareike Töpperwien; Franziska van der Meer; Christine Stadelmann; Tim Salditt
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-18       Impact factor: 11.205

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