Literature DB >> 19337660

Multiparameter fluorescence image spectroscopy to study molecular interactions.

Stefanie Weidtkamp-Peters1, Suren Felekyan, Andrea Bleckmann, Rüdiger Simon, Wolfgang Becker, Ralf Kühnemuth, Claus A M Seidel.   

Abstract

Multiparameter Fluorescence Image Spectroscopy (MFIS) is used to monitor simultaneously a variety of fluorescence parameters in confocal fluorescence microscopy. As the photons are registered one by one, MFIS allows for fully parallel recording of Fluorescence Correlation/Cross Correlation Spectroscopy (FCS/FCCS), fluorescence lifetime and pixel/image information over time periods of hours with picosecond accuracy. The analysis of the pixel fluorescence information in higher-dimensional histograms maximizes the selectivity of fluorescence microscopic methods. Moreover it facilitates a statistically-relevant data analysis of the pixel information which makes an efficient detection of heterogeneities possible. The reliability of MFIS has been demonstrated for molecular interaction studies in different complex environments: (I) detecting the heterogeneity of diffusion properties of the dye Rhodamine 110 in a sepharose bead, (II) Förster Resonance Energy Transfer (FRET) studies in mammalian HEK293 cells, and (III) FRET study of the homodimerisation of the transcription factor BIM1 in plant cells. The multidimensional analysis of correlated changes of several parameters measured by FRET, FCS, fluorescence lifetime and anisotropy increases the robustness of the analysis significantly. The economic use of photon information allows one to keep the expression levels of fluorescent protein-fusion proteins as low as possible (down to the single-molecule level).

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Year:  2009        PMID: 19337660     DOI: 10.1039/b903245m

Source DB:  PubMed          Journal:  Photochem Photobiol Sci        ISSN: 1474-905X            Impact factor:   3.982


  21 in total

1.  The GTPase activity of murine guanylate-binding protein 2 (mGBP2) controls the intracellular localization and recruitment to the parasitophorous vacuole of Toxoplasma gondii.

Authors:  Elisabeth Kravets; Daniel Degrandi; Stefanie Weidtkamp-Peters; Britta Ries; Carolin Konermann; Suren Felekyan; Julia M Dargazanli; Gerrit J K Praefcke; Claus A M Seidel; Lutz Schmitt; Sander H J Smits; Klaus Pfeffer
Journal:  J Biol Chem       Date:  2012-06-22       Impact factor: 5.157

2.  In vivo FRET-FLIM reveals cell-type-specific protein interactions in Arabidopsis roots.

Authors:  Yuchen Long; Yvonne Stahl; Stefanie Weidtkamp-Peters; Marten Postma; Wenkun Zhou; Joachim Goedhart; María-Isabel Sánchez-Pérez; Theodorus W J Gadella; Rüdiger Simon; Ben Scheres; Ikram Blilou
Journal:  Nature       Date:  2017-07-26       Impact factor: 49.962

Review 3.  Quantifying intracellular dynamics using fluorescence fluctuation spectroscopy.

Authors:  Mark A Hink
Journal:  Protoplasma       Date:  2014-01-14       Impact factor: 3.356

4.  TRANSPARENT TESTA GLABRA1 and GLABRA1 Compete for Binding to GLABRA3 in Arabidopsis.

Authors:  Martina Pesch; Ilka Schultheiß; Karsten Klopffleisch; Joachim F Uhrig; Manfred Koegl; Christoph S Clemen; Rüdiger Simon; Stefanie Weidtkamp-Peters; Martin Hülskamp
Journal:  Plant Physiol       Date:  2015-04-29       Impact factor: 8.340

5.  Fine mapping of the dialytic gene that controls multicellular trichome formation and stamen development in tomato.

Authors:  Jiang Chang; Ting Yu; Shenghua Gao; Cheng Xiong; Qingmin Xie; Hanxia Li; Zhibiao Ye; Changxian Yang
Journal:  Theor Appl Genet       Date:  2016-05-05       Impact factor: 5.699

Review 6.  Lessons in fluctuation correlation spectroscopy.

Authors:  Michelle A Digman; Enrico Gratton
Journal:  Annu Rev Phys Chem       Date:  2011       Impact factor: 12.703

7.  Fluorescence fluctuation spectroscopy: ushering in a new age of enlightenment for cellular dynamics.

Authors:  David M Jameson; Justin A Ross; Joseph P Albanesi
Journal:  Biophys Rev       Date:  2009-09-01

8.  Studying Protein-Protein Interactions at Plasmodesmata by Measuring Förster Resonance Energy Transfer.

Authors:  Patrick Blümke; Vicky Howe; Rüdiger Simon
Journal:  Methods Mol Biol       Date:  2022

9.  Stem cell signaling in Arabidopsis requires CRN to localize CLV2 to the plasma membrane.

Authors:  Andrea Bleckmann; Stefanie Weidtkamp-Peters; Claus A M Seidel; Rüdiger Simon
Journal:  Plant Physiol       Date:  2009-11-20       Impact factor: 8.340

Review 10.  FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.

Authors:  Eitan Lerner; Anders Barth; Jelle Hendrix; Benjamin Ambrose; Victoria Birkedal; Scott C Blanchard; Richard Börner; Hoi Sung Chung; Thorben Cordes; Timothy D Craggs; Ashok A Deniz; Jiajie Diao; Jingyi Fei; Ruben L Gonzalez; Irina V Gopich; Taekjip Ha; Christian A Hanke; Gilad Haran; Nikos S Hatzakis; Sungchul Hohng; Seok-Cheol Hong; Thorsten Hugel; Antonino Ingargiola; Chirlmin Joo; Achillefs N Kapanidis; Harold D Kim; Ted Laurence; Nam Ki Lee; Tae-Hee Lee; Edward A Lemke; Emmanuel Margeat; Jens Michaelis; Xavier Michalet; Sua Myong; Daniel Nettels; Thomas-Otavio Peulen; Evelyn Ploetz; Yair Razvag; Nicole C Robb; Benjamin Schuler; Hamid Soleimaninejad; Chun Tang; Reza Vafabakhsh; Don C Lamb; Claus Am Seidel; Shimon Weiss
Journal:  Elife       Date:  2021-03-29       Impact factor: 8.140

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