Literature DB >> 19328766

A time-resolved fluorescence resonance energy transfer-based assay for DEN1 peptidase activity.

Ingo H Engels1, Catherine Daguia, Truc Huynh, Hugo Urbina, Jörg Buddenkotte, Andrew Schumacher, Jeremy S Caldwell, Achim Brinker.   

Abstract

Neural precursor cell expressed, developmentally down-regulated gene 8 (NEDD8) is a recently discovered ubiquitin-like posttranslational modifier. NEDD8 acts predominantly as a regulator of ubiquitin-protein ligases and as a decoy for proteins targeted for proteasomal degradation. It thereby controls key events in cell cycle progression and embryogenesis. Deneddylase-1 (DEN1/NEDP1/SENP8) features a selective peptidase activity converting the proNEDD8 precursor to its mature form and an isopeptidase activity deconjugating NEDD8 from substrates such as cullins and p53. In this study, we describe a high-throughput screening (HTS)-compatible time-resolved fluorescent resonance energy transfer (TR-FRET) assay measuring the peptidase activity of DEN1.

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Year:  2009        PMID: 19328766     DOI: 10.1016/j.ab.2009.03.035

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  8 in total

1.  Isopeptidases in anticancer therapy: looking for inhibitors.

Authors:  Andrea Sgorbissa; Harish Potu; Claudio Brancolini
Journal:  Am J Transl Res       Date:  2010-05-10       Impact factor: 4.060

2.  A time-resolved Förster resonance energy transfer assay to measure activity of the deamidase of the prokaryotic ubiquitin-like protein.

Authors:  Ian C Eustis; Jessica Huang; Meagan E Pilkerton; Samuel D Whedon; Champak Chatterjee
Journal:  Anal Biochem       Date:  2015-07-21       Impact factor: 3.365

3.  Quantitative FRET (Förster Resonance Energy Transfer) analysis for SENP1 protease kinetics determination.

Authors:  Yan Liu; Jiayu Liao
Journal:  J Vis Exp       Date:  2013-02-21       Impact factor: 1.355

4.  Isopeptidase Kinetics Determination by a Real Time and Sensitive qFRET Approach.

Authors:  Yan Liu; Yali Shen; Yang Song; Lei Xu; J Jefferson P Perry; Jiayu Liao
Journal:  Biomolecules       Date:  2021-04-30

5.  A Biochemical/Biophysical Assay Dyad for HTS-Compatible Triaging of Inhibitors of the HIV-1 Nef/Hck SH3 Interaction.

Authors:  Sebastian Breuer; Sheryll Espinola; Xavier Morelli; Bruce E Torbett; Stefan T Arold; Ingo H Engels
Journal:  Curr Chem Genom Transl Med       Date:  2013-07-26

6.  Inhibition of the deubiquitinase USP8 corrects a Drosophila PINK1 model of mitochondria dysfunction.

Authors:  Sophia von Stockum; Alvaro Sanchez-Martinez; Samantha Corrà; Joy Chakraborty; Elena Marchesan; Lisa Locatello; Caterina Da Rè; Paola Cusumano; Federico Caicci; Vanni Ferrari; Rodolfo Costa; Luigi Bubacco; Maria Berica Rasotto; Ildiko Szabo; Alexander J Whitworth; Luca Scorrano; Elena Ziviani
Journal:  Life Sci Alliance       Date:  2019-04-15

7.  Internal calibration Förster resonance energy transfer assay: a real-time approach for determining protease kinetics.

Authors:  Ling Jiang; Yan Liu; Yang Song; Amanda N Saavedra; Songqin Pan; Wensheng Xiang; Jiayu Liao
Journal:  Sensors (Basel)       Date:  2013-04-08       Impact factor: 3.576

8.  Ubiquitination-induced fluorescence complementation (UiFC) for detection of K48 ubiquitin chains in vitro and in live cells.

Authors:  Zhiliang Chen; Yongwang Zhong; Yang Wang; Shan Xu; Zheng Liu; Ilia V Baskakov; Mervyn J Monteiro; Mariusz Karbowski; Yuxian Shen; Shengyun Fang
Journal:  PLoS One       Date:  2013-09-05       Impact factor: 3.240

  8 in total

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