Literature DB >> 19322165

Time-to-signal comparison for drug safety data-mining algorithms vs. traditional signaling criteria.

A M Hochberg1, M Hauben.   

Abstract

Data mining may improve identification of signals, but its incremental utility is in question. The objective of this study was to compare associations highlighted by data mining vs. those highlighted through the use of traditional decision rules. In the case of 29 drugs, we used US Food and Drug Administration (FDA) Adverse Event Reporting System (AERS) data to compare three data-mining algorithms (DMAs) with two traditional decision rules: (i) N >or= 3 reports for a designated medical event (DME) and (ii) any event comprising >2% of reports in relation to a drug. Data-mining methods produced 101-324 signals vs. 1,051 for the N >or= 3 rule but yielded a higher proportion of signals having publication support. For the 2% rule, the fraction of signals having publication support was similar to that associated with data mining. Data-mining signals lagged N >or= 3 signaling by 1.5-11.0 months. It may therefore be concluded that data mining identifies fewer signals than the "N >or= 3 DME" rule. The signals appear later with data mining but are more often supported by publications. In the case of the 2% rule, no such difference in publication support was observed.

Entities:  

Mesh:

Year:  2009        PMID: 19322165     DOI: 10.1038/clpt.2009.26

Source DB:  PubMed          Journal:  Clin Pharmacol Ther        ISSN: 0009-9236            Impact factor:   6.875


  15 in total

1.  Implementation of an automated signal detection method in the French pharmacovigilance database: a feasibility study.

Authors:  Véronique Pizzoglio; Ismaïl Ahmed; Pascal Auriche; Pascale Tuber-Bitter; Françoise Haramburu; Carmen Kreft-Jaïs; Ghada Miremont-Salamé
Journal:  Eur J Clin Pharmacol       Date:  2011-12-06       Impact factor: 2.953

2.  A decade of data mining and still counting.

Authors:  Manfred Hauben; G Niklas Norén
Journal:  Drug Saf       Date:  2010-07-01       Impact factor: 5.606

3.  Antimicrobials and the risk of torsades de pointes: the contribution from data mining of the US FDA Adverse Event Reporting System.

Authors:  Elisabetta Poluzzi; Emanuel Raschi; Domenico Motola; Ugo Moretti; Fabrizio De Ponti
Journal:  Drug Saf       Date:  2010-04-01       Impact factor: 5.606

4.  Early detection of pharmacovigilance signals with automated methods based on false discovery rates: a comparative study.

Authors:  Ismaïl Ahmed; Frantz Thiessard; Ghada Miremont-Salamé; Françoise Haramburu; Carmen Kreft-Jais; Bernard Bégaud; Pascale Tubert-Bitter
Journal:  Drug Saf       Date:  2012-06-01       Impact factor: 5.606

5.  Using information mining of the medical literature to improve drug safety.

Authors:  Kanaka D Shetty; Siddhartha R Dalal
Journal:  J Am Med Inform Assoc       Date:  2011-05-05       Impact factor: 4.497

6.  A novel signal detection algorithm for identifying hidden drug-drug interactions in adverse event reports.

Authors:  Nicholas P Tatonetti; Guy Haskin Fernald; Russ B Altman
Journal:  J Am Med Inform Assoc       Date:  2011-06-14       Impact factor: 4.497

7.  Sources of information on lymphoma associated with anti-tumour necrosis factor agents: comparison of published case reports and cases reported to the French pharmacovigilance system.

Authors:  Hélène Théophile; Thierry Schaeverbeke; Ghada Miremont-Salamé; Abdelilah Abouelfath; Valentine Kahn; Françoise Haramburu; Bernard Bégaud
Journal:  Drug Saf       Date:  2011-07-01       Impact factor: 5.606

8.  An evaluation of three signal-detection algorithms using a highly inclusive reference event database.

Authors:  Alan M Hochberg; Manfred Hauben; Ronald K Pearson; Donald J O'Hara; Stephanie J Reisinger; David I Goldsmith; A Lawrence Gould; David Madigan
Journal:  Drug Saf       Date:  2009       Impact factor: 5.606

Review 9.  Data mining of the public version of the FDA Adverse Event Reporting System.

Authors:  Toshiyuki Sakaeda; Akiko Tamon; Kaori Kadoyama; Yasushi Okuno
Journal:  Int J Med Sci       Date:  2013-04-25       Impact factor: 3.738

10.  Information technology in pharmacovigilance: Benefits, challenges, and future directions from industry perspectives.

Authors:  Zhengwu Lu
Journal:  Drug Healthc Patient Saf       Date:  2009-10-15
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