Literature DB >> 19319936

Crystal structure of AFV1-102, a protein from the acidianus filamentous virus 1.

Jenny Keller1, Nicolas Leulliot, Bruno Collinet, Valerie Campanacci, Christian Cambillau, David Pranghisvilli, Herman van Tilbeurgh.   

Abstract

Viruses infecting hyperthermophilic archaea have intriguing morphologies and genomic properties. The vast majority of their genes do not have homologs other than in other hyperthermophilic viruses, and the biology of these viruses is poorly understood. As part of a structural genomics project on the proteins of these viruses, we present here the structure of a 102 amino acid protein from acidianus filamentous virus 1 (AFV1-102). The structure shows that it is made of two identical motifs that have poor sequence similarity. Although no function can be proposed from structural analysis, tight binding of the gateway tag peptide in a groove between the two motifs suggests AFV1-102 is involved in protein protein interactions.

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Year:  2009        PMID: 19319936      PMCID: PMC2762596          DOI: 10.1002/pro.79

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  28 in total

1.  GATEWAY recombinational cloning: application to the cloning of large numbers of open reading frames or ORFeomes.

Authors:  A J Walhout; G F Temple; M A Brasch; J L Hartley; M A Lorson; S van den Heuvel; M Vidal
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

2.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

Review 3.  Viruses of hyperthermophilic Crenarchaea.

Authors:  David Prangishvili; Roger A Garrett
Journal:  Trends Microbiol       Date:  2005-09-08       Impact factor: 17.079

4.  TTSV1, a new virus-like particle isolated from the hyperthermophilic crenarchaeote Thermoproteus tenax.

Authors:  Dae-Gyun Ahn; Se-Il Kim; Jin-Kyu Rhee; Kwang Pyo Kim; Jae-Gu Pan; Jong-Won Oh
Journal:  Virology       Date:  2006-05-06       Impact factor: 3.616

5.  Observation of virus-like particles in high temperature enrichment cultures from deep-sea hydrothermal vents.

Authors:  Claire Geslin; Marc Le Romancer; Mélusine Gaillard; Gael Erauso; Daniel Prieur
Journal:  Res Microbiol       Date:  2003-05       Impact factor: 3.992

6.  Sulfolobus tengchongensis spindle-shaped virus STSV1: virus-host interactions and genomic features.

Authors:  Xiaoyu Xiang; Lanming Chen; Xiaoxing Huang; Yuanmin Luo; Qunxin She; Li Huang
Journal:  J Virol       Date:  2005-07       Impact factor: 5.103

7.  Biochemical and phylogenetic characterization of the dUTPase from the archaeal virus SIRV.

Authors:  D Prangishvili; H P Klenk; G Jakobs; A Schmiechen; C Hanselmann; I Holz; W Zillig
Journal:  J Biol Chem       Date:  1998-03-13       Impact factor: 5.157

8.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

9.  The structure of a thermophilic archaeal virus shows a double-stranded DNA viral capsid type that spans all domains of life.

Authors:  George Rice; Liang Tang; Kenneth Stedman; Francisco Roberto; Josh Spuhler; Eric Gillitzer; John E Johnson; Trevor Douglas; Mark Young
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-03       Impact factor: 11.205

Review 10.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14
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  4 in total

1.  ORF157 from the archaeal virus Acidianus filamentous virus 1 defines a new class of nuclease.

Authors:  Adeline Goulet; Mery Pina; Peter Redder; David Prangishvili; Laura Vera; Julie Lichière; Nicolas Leulliot; Herman van Tilbeurgh; Miguel Ortiz-Lombardia; Valérie Campanacci; Christian Cambillau
Journal:  J Virol       Date:  2010-03-03       Impact factor: 5.103

2.  Acidianus filamentous virus 1 coat proteins display a helical fold spanning the filamentous archaeal viruses lineage.

Authors:  Adeline Goulet; Stéphanie Blangy; Peter Redder; David Prangishvili; Catarina Felisberto-Rodrigues; Patrick Forterre; Valérie Campanacci; Christian Cambillau
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-23       Impact factor: 11.205

Review 3.  A survey of protein structures from archaeal viruses.

Authors:  Nikki Dellas; C Martin Lawrence; Mark J Young
Journal:  Life (Basel)       Date:  2013-01-24

4.  Crystal structure of PAV1-137: a protein from the virus PAV1 that infects Pyrococcus abyssi.

Authors:  N Leulliot; S Quevillon-Cheruel; M Graille; C Geslin; D Flament; M Le Romancer; H van Tilbeurgh
Journal:  Archaea       Date:  2013-03-04       Impact factor: 3.273

  4 in total

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