Literature DB >> 19318476

Microarray analysis of early stage serous ovarian cancers shows profiles predictive of favorable outcome.

Andrew Berchuck1, Edwin S Iversen, Jingqin Luo, Jennifer P Clarke, Hisani Horne, Douglas A Levine, Jeff Boyd, Miguel A Alonso, Angeles Alvarez Secord, Marcus Q Bernardini, Jason C Barnett, Todd Boren, Susan K Murphy, Holly K Dressman, Jeffrey R Marks, Johnathan M Lancaster.   

Abstract

PURPOSE: Although few women with advanced serous ovarian cancer are cured, detection of the disease at an early stage is associated with a much higher likelihood of survival. We previously used gene expression array analysis to distinguish subsets of advanced cancers based on disease outcome. In the present study, we report on gene expression of early-stage cancers and validate our prognostic model for advanced-stage cancers. EXPERIMENTAL
DESIGN: Frozen specimens from 39 stage I/II, 42 stage III/IV, and 20 low malignant potential cancers were obtained from four different sites. A linear discriminant model was used to predict survival based upon array data.
RESULTS: We validated the late-stage survival model and show that three of the most differentially expressed genes continue to be predictive of outcome. Most early-stage cancers (38 of 39 invasive, 15 of 20 low malignant potential) were classified as long-term survivors (median probabilities 0.97 and 0.86). MAL, the most differentially expressed gene, was further validated at the protein level and found to be an independent predictor of poor survival in an unselected group of advanced serous cancers (P = 0.0004).
CONCLUSIONS: These data suggest that serous ovarian cancers detected at an early stage generally have a favorable underlying biology similar to advanced-stage cases that are long-term survivors. Conversely, most late-stage ovarian cancers seem to have a more virulent biology. This insight suggests that if screening approaches are to succeed it will be necessary to develop approaches that are able to detect these virulent cancers at an early stage.

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Year:  2009        PMID: 19318476      PMCID: PMC3050629          DOI: 10.1158/1078-0432.CCR-08-2430

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  29 in total

1.  Adjustment of systematic microarray data biases.

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2.  A cross-study comparison of gene expression studies for the molecular classification of lung cancer.

Authors:  Giovanni Parmigiani; Elizabeth S Garrett-Mayer; Ramaswamy Anbazhagan; Edward Gabrielson
Journal:  Clin Cancer Res       Date:  2004-05-01       Impact factor: 12.531

3.  Genetic analysis of early- versus late-stage ovarian tumors.

Authors:  V Shridhar; J Lee; A Pandita; S Iturria; R Avula; J Staub; M Morrissey; E Calhoun; A Sen; K Kalli; G Keeney; P Roche; W Cliby; K Lu; R Schmandt; G B Mills; R C Bast; C D James; F J Couch; L C Hartmann; J Lillie; D I Smith
Journal:  Cancer Res       Date:  2001-08-01       Impact factor: 12.701

4.  Three cycles versus six cycles of adjuvant paclitaxel (Taxol)/carboplatin in early stage ovarian cancer.

Authors:  R C Young
Journal:  Semin Oncol       Date:  2000-06       Impact factor: 4.929

5.  Prognostic significance of p53 mutation and p53 overexpression in advanced epithelial ovarian cancer: a Gynecologic Oncology Group Study.

Authors:  Laura Havrilesky; kathleen M Darcy; Hasnah Hamdan; Roger L Priore; Jorge Leon; Jeffrey Bell; Andrew Berchuck
Journal:  J Clin Oncol       Date:  2003-10-15       Impact factor: 44.544

6.  Phase III trial of carboplatin and paclitaxel compared with cisplatin and paclitaxel in patients with optimally resected stage III ovarian cancer: a Gynecologic Oncology Group study.

Authors:  Robert F Ozols; Brian N Bundy; Benjamin E Greer; Jeffrey M Fowler; Daniel Clarke-Pearson; Robert A Burger; Robert S Mannel; Koen DeGeest; Ellen M Hartenbach; Rebecca Baergen
Journal:  J Clin Oncol       Date:  2003-07-14       Impact factor: 44.544

7.  The effect of diameter of largest residual disease on survival after primary cytoreductive surgery in patients with suboptimal residual epithelial ovarian carcinoma.

Authors:  W J Hoskins; W P McGuire; M F Brady; H D Homesley; W T Creasman; M Berman; H Ball; J S Berek
Journal:  Am J Obstet Gynecol       Date:  1994-04       Impact factor: 8.661

8.  Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome.

Authors:  Richard W Tothill; Anna V Tinker; Joshy George; Robert Brown; Stephen B Fox; Stephen Lade; Daryl S Johnson; Melanie K Trivett; Dariush Etemadmoghadam; Bianca Locandro; Nadia Traficante; Sian Fereday; Jillian A Hung; Yoke-Eng Chiew; Izhak Haviv; Dorota Gertig; Anna DeFazio; David D L Bowtell
Journal:  Clin Cancer Res       Date:  2008-08-15       Impact factor: 12.531

9.  Mutation and expression of the TP53 gene in early stage epithelial ovarian carcinoma.

Authors:  Mario M Leitao; Robert A Soslow; Rebecca N Baergen; Narciso Olvera; Crispinita Arroyo; Jeff Boyd
Journal:  Gynecol Oncol       Date:  2004-05       Impact factor: 5.482

10.  Gene expression in ovarian cancer reflects both morphology and biological behavior, distinguishing clear cell from other poor-prognosis ovarian carcinomas.

Authors:  Donald R Schwartz; Sharon L R Kardia; Kerby A Shedden; Rork Kuick; George Michailidis; Jeremy M G Taylor; David E Misek; Rong Wu; Yali Zhai; Danielle M Darrah; Heather Reed; Lora H Ellenson; Thomas J Giordano; Eric R Fearon; Samir M Hanash; Kathleen R Cho
Journal:  Cancer Res       Date:  2002-08-15       Impact factor: 12.701

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  30 in total

1.  Integration and bioinformatics analysis of DNA-methylated genes associated with drug resistance in ovarian cancer.

Authors:  Bingbing Yan; Fuqiang Yin; Q I Wang; Wei Zhang; L I Li
Journal:  Oncol Lett       Date:  2016-05-18       Impact factor: 2.967

2.  Validation of ovarian cancer gene expression signatures for survival and subtype in formalin fixed paraffin embedded tissues.

Authors:  Gregory P Sfakianos; Edwin S Iversen; Regina Whitaker; Liudmila Akushevich; Joellen M Schildkraut; Susan K Murphy; Jeffrey R Marks; Andrew Berchuck
Journal:  Gynecol Oncol       Date:  2012-12-26       Impact factor: 5.482

3.  Ovarian cancer screening and early detection in the general population.

Authors:  Jose A Rauh-Hain; Thomas C Krivak; Marcela G Del Carmen; Alexander B Olawaiye
Journal:  Rev Obstet Gynecol       Date:  2011

4.  Differential expression of immune related genes in high-grade ovarian serous carcinoma.

Authors:  Sharareh Siamakpour-Reihani; Lauren Patterson Cobb; Chen Jiang; Dadong Zhang; Rebecca A Previs; Kouros Owzar; Andrew B Nixon; Angeles Alvarez Secord
Journal:  Gynecol Oncol       Date:  2020-01-07       Impact factor: 5.482

5.  Bayesian probit regression model for the diagnosis of pulmonary fibrosis: proof-of-principle.

Authors:  Eric B Meltzer; William T Barry; Thomas A D'Amico; Robert D Davis; Shu S Lin; Mark W Onaitis; Lake D Morrison; Thomas A Sporn; Mark P Steele; Paul W Noble
Journal:  BMC Med Genomics       Date:  2011-10-05       Impact factor: 3.063

Review 6.  Ovarian cancer: involvement of the matrix metalloproteinases.

Authors:  Linah Al-Alem; Thomas E Curry
Journal:  Reproduction       Date:  2015-04-27       Impact factor: 3.906

7.  Expression signatures of TP53 mutations in serous ovarian cancers.

Authors:  Marcus Q Bernardini; Tsukasa Baba; Paula S Lee; Jason C Barnett; Gregory P Sfakianos; Angeles Alvarez Secord; Susan K Murphy; Edwin Iversen; Jeffrey R Marks; Andrew Berchuck
Journal:  BMC Cancer       Date:  2010-05-26       Impact factor: 4.430

8.  Gene expression profile for predicting survival in advanced-stage serous ovarian cancer across two independent datasets.

Authors:  Kosuke Yoshihara; Atsushi Tajima; Tetsuro Yahata; Shoji Kodama; Hiroyuki Fujiwara; Mitsuaki Suzuki; Yoshitaka Onishi; Masayuki Hatae; Kazunobu Sueyoshi; Hisaya Fujiwara; Yoshiki Kudo; Kohei Kotera; Hideaki Masuzaki; Hironori Tashiro; Hidetaka Katabuchi; Ituro Inoue; Kenichi Tanaka
Journal:  PLoS One       Date:  2010-03-12       Impact factor: 3.240

9.  Regulatory network involving miRNAs and genes in serous ovarian carcinoma.

Authors:  Haiyan Zhao; Hao Xu; Luchen Xue
Journal:  Oncol Lett       Date:  2017-09-14       Impact factor: 2.967

10.  Prognostic significance of differential expression of angiogenic genes in women with high-grade serous ovarian carcinoma.

Authors:  Sharareh Siamakpour-Reihani; Kouros Owzar; Chen Jiang; Taylor Turner; Yiwen Deng; Sarah M Bean; Janet K Horton; Andrew Berchuck; Jeffrey R Marks; Mark W Dewhirst; Angeles Alvarez Secord
Journal:  Gynecol Oncol       Date:  2015-08-07       Impact factor: 5.482

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