Literature DB >> 19308327

DFT-based QSAR and QSPR models of several cis-platinum complexes: solvent effect.

Pubalee Sarmah1, Ramesh C Deka.   

Abstract

Cytotoxic activities of cis-platinum complexes against parental and resistant ovarian cancer cell lines were investigated by quantitative structure-activity relationship (QSAR) analysis using density functional theory (DFT) based descriptors. The calculated parameters were found to increase the predictability of each QSAR model with incorporation of solvent effects indicating its importance in studying biological activity. Given the importance of logarithmic n-octanol/water partition coefficient (log P(o/w)) in drug metabolism and cellular uptake, we modeled the log P(o/w) of 24 platinum complexes with different leaving and carrier ligands by the quantitative structure-property relationship (QSPR) analysis against five different concentrations of MeOH using DFT and molecular mechanics derived descriptors. The log P(o/w) values of an additional set of 20 platinum complexes were also modeled with the same descriptors. We investigated the predictability of the model by calculating log P(o/w) of four compounds in the test set and found their predicted values to be in good agreement with the experimental values. The QSPR analyses performed on 24 complexes, combining the training and test sets, also provided significant values for the statistical parameters. The solvent medium played an important role in QSPR analysis by increasing the internal predictive ability of the models.

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Year:  2009        PMID: 19308327     DOI: 10.1007/s10822-009-9265-4

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  29 in total

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Authors:  Y Zhang; Z Guo; X Z You
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3.  Synthesis and QSAR study of the anticancer activity of some novel indane carbocyclic nucleosides.

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Journal:  Bioorg Med Chem       Date:  2003-11-17       Impact factor: 3.641

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Authors:  Yogita Mantri; Stephen J Lippard; Mu-Hyun Baik
Journal:  J Am Chem Soc       Date:  2007-04-03       Impact factor: 15.419

Review 5.  Clinical development of platinum complexes in cancer therapy: an historical perspective and an update.

Authors:  D Lebwohl; R Canetta
Journal:  Eur J Cancer       Date:  1998-09       Impact factor: 9.162

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Authors:  S W Dietrich; N D Dreyer; C Hansch; D L Bentley
Journal:  J Med Chem       Date:  1980-11       Impact factor: 7.446

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Authors:  Dong Wang; Stephen J Lippard
Journal:  Nat Rev Drug Discov       Date:  2005-04       Impact factor: 84.694

8.  A QM/MM study of cisplatin-DNA oligonucleotides: from simple models to realistic systems.

Authors:  Arturo Robertazzi; James A Platts
Journal:  Chemistry       Date:  2006-07-24       Impact factor: 5.236

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Authors:  James A Platts; Steven P Oldfield; Maria M Reif; Alessandra Palmucci; Elisabetta Gabano; Domenico Osella
Journal:  J Inorg Biochem       Date:  2006-07       Impact factor: 4.155

10.  How strong can the bend be on a DNA helix from cisplatin? DFT and MP2 quantum chemical calculations of cisplatin-bridged DNA purine bases.

Authors:  Jaroslav V Burda; Jerzy Leszczynski
Journal:  Inorg Chem       Date:  2003-11-03       Impact factor: 5.165

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  7 in total

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Journal:  J Mol Model       Date:  2018-02-17       Impact factor: 1.810

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Authors:  Amrit Sarmah; Ram Kinkar Roy
Journal:  J Comput Aided Mol Des       Date:  2014-09-03       Impact factor: 3.686

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Journal:  J Mol Model       Date:  2009-07-21       Impact factor: 1.810

4.  Drug design for ever, from hype to hope.

Authors:  G Seddon; V Lounnas; R McGuire; T van den Bergh; R P Bywater; L Oliveira; G Vriend
Journal:  J Comput Aided Mol Des       Date:  2012-01-18       Impact factor: 3.686

5.  Idarubicin-Gold Complex: From Crystal Growth to Gold Nanoparticles.

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Journal:  ACS Omega       Date:  2021-01-04

6.  Flavin-adenine-dinucleotide gold complex nanoparticles: chemical modeling design, physico-chemical assessment and perspectives in nanomedicine.

Authors:  Celia Arib; Nadia Bouchemal; Maria Barile; Didier Paleni; Nadia Djaker; Nathalie Dupont; Jolanda Spadavecchia
Journal:  Nanoscale Adv       Date:  2021-08-19

7.  Theoretical investigations and density functional theory based quantitative structure-activity relationships model for novel cytotoxic platinum(IV) complexes.

Authors:  Hristo P Varbanov; Michael A Jakupec; Alexander Roller; Frank Jensen; Mathea Sophia Galanski; Bernhard K Keppler
Journal:  J Med Chem       Date:  2012-12-27       Impact factor: 7.446

  7 in total

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