Literature DB >> 19304663

Spectroscopic insights into the oxygen-tolerant membrane-associated [NiFe] hydrogenase of Ralstonia eutropha H16.

Miguel Saggu1, Ingo Zebger, Marcus Ludwig, Oliver Lenz, Bärbel Friedrich, Peter Hildebrandt, Friedhelm Lendzian.   

Abstract

This study provides the first spectroscopic characterization of the membrane-bound oxygen-tolerant [NiFe] hydrogenase (MBH) from Ralstonia eutropha H16 in its natural environment, the cytoplasmic membrane. The H2-converting MBH is composed of a large subunit, harboring the [NiFe] active site, and a small subunit, capable in coordinating one [3Fe4S] and two [4Fe4S] clusters. The hydrogenase dimer is electronically connected to a membrane-integral cytochrome b. EPR and Fourier transform infrared spectroscopy revealed a strong similarity of the MBH active site with known [NiFe] centers from strictly anaerobic hydrogenases. Most redox states characteristic for anaerobic [NiFe] hydrogenases were identified except for one remarkable difference. The formation of the oxygen-inhibited Niu-A state was never observed. Furthermore, EPR data showed the presence of an additional paramagnetic center at high redox potential (+290 mV), which couples magnetically to the [3Fe4S] center and indicates a structural and/or redox modification at or near the proximal [4Fe4S] cluster. Additionally, significant differences regarding the magnetic coupling between the Nia-C state and [4Fe4S] clusters were observed in the reduced form of the MBH. The spectroscopic properties are discussed with regard to the unusual oxygen tolerance of this hydrogenase and in comparison with those of the solubilized, dimeric form of the MBH.

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Year:  2009        PMID: 19304663      PMCID: PMC2713555          DOI: 10.1074/jbc.M805690200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  55 in total

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Journal:  J Bacteriol       Date:  1992-10       Impact factor: 3.490

2.  Enlarging the gas access channel to the active site renders the regulatory hydrogenase HupUV of Rhodobacter capsulatus O2 sensitive without affecting its transductory activity.

Authors:  Ophélie Duché; Sylvie Elsen; Laurent Cournac; Annette Colbeau
Journal:  FEBS J       Date:  2005-08       Impact factor: 5.542

3.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

4.  An efficient and reproducible procedure for the formation of spheroplasts from variously grown Escherichia coli.

Authors:  B Witholt; M Boekhout; M Brock; J Kingma; H V Heerikhuizen; L D Leij
Journal:  Anal Biochem       Date:  1976-07       Impact factor: 3.365

5.  Characterization of a cyanobacterial-like uptake [NiFe] hydrogenase: EPR and FTIR spectroscopic studies of the enzyme from Acidithiobacillus ferrooxidans.

Authors:  Olga Schröder; Boris Bleijlevens; Thyra E de Jongh; Zhujun Chen; Tianshu Li; Jörg Fischer; Jochen Förster; Cornelius G Friedrich; Kimberly A Bagley; Simon P J Albracht; Wolfgang Lubitz
Journal:  J Biol Inorg Chem       Date:  2006-11-03       Impact factor: 3.358

6.  Single crystal EPR studies of the oxidized active site of [NiFe] hydrogenase from Desulfovibrio vulgaris Miyazaki F.

Authors:  O Trofanchuk; M Stein; C Gessner; F Lendzian; Y Higuchi; W Lubitz
Journal:  J Biol Inorg Chem       Date:  2000-02       Impact factor: 3.358

7.  Structural and oxidation-state changes at its nonstandard Ni-Fe site during activation of the NAD-reducing hydrogenase from Ralstonia eutropha detected by X-ray absorption, EPR, and FTIR spectroscopy.

Authors:  Tanja Burgdorf; Simone Löscher; Peter Liebisch; Eddy Van der Linden; Marcus Galander; Friedhelm Lendzian; Wolfram Meyer-Klaucke; Simon P J Albracht; Bärbel Friedrich; Holger Dau; Michael Haumann
Journal:  J Am Chem Soc       Date:  2005-01-19       Impact factor: 15.419

8.  Oxygen-tolerant H2 oxidation by membrane-bound [NiFe] hydrogenases of ralstonia species. Coping with low level H2 in air.

Authors:  Marcus Ludwig; James A Cracknell; Kylie A Vincent; Fraser A Armstrong; Oliver Lenz
Journal:  J Biol Chem       Date:  2008-11-06       Impact factor: 5.157

9.  Further characterization of the spin coupling observed in oxidized hydrogenase from Chromatium vinosum. A Mössbauer and multifrequency EPR study.

Authors:  K K Surerus; M Chen; J W van der Zwaan; F M Rusnak; M Kolk; E C Duin; S P Albracht; E Münck
Journal:  Biochemistry       Date:  1994-04-26       Impact factor: 3.162

10.  Electrochemical definitions of O2 sensitivity and oxidative inactivation in hydrogenases.

Authors:  Kylie A Vincent; Alison Parkin; Oliver Lenz; Simon P J Albracht; Juan C Fontecilla-Camps; Richard Cammack; Bärbel Friedrich; Fraser A Armstrong
Journal:  J Am Chem Soc       Date:  2005-12-28       Impact factor: 15.419

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  20 in total

1.  The crystal structure of an oxygen-tolerant hydrogenase uncovers a novel iron-sulphur centre.

Authors:  Johannes Fritsch; Patrick Scheerer; Stefan Frielingsdorf; Sebastian Kroschinsky; Bärbel Friedrich; Oliver Lenz; Christian M T Spahn
Journal:  Nature       Date:  2011-10-16       Impact factor: 49.962

2.  Structural basis for a [4Fe-3S] cluster in the oxygen-tolerant membrane-bound [NiFe]-hydrogenase.

Authors:  Yasuhito Shomura; Ki-Seok Yoon; Hirofumi Nishihara; Yoshiki Higuchi
Journal:  Nature       Date:  2011-10-16       Impact factor: 49.962

3.  The maturation factors HoxR and HoxT contribute to oxygen tolerance of membrane-bound [NiFe] hydrogenase in Ralstonia eutropha H16.

Authors:  Johannes Fritsch; Oliver Lenz; Bärbel Friedrich
Journal:  J Bacteriol       Date:  2011-03-25       Impact factor: 3.490

4.  Characterization of a unique [FeS] cluster in the electron transfer chain of the oxygen tolerant [NiFe] hydrogenase from Aquifex aeolicus.

Authors:  Maria-Eirini Pandelia; Wolfgang Nitschke; Pascale Infossi; Marie-Thérèse Giudici-Orticoni; Eckhard Bill; Wolfgang Lubitz
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

5.  Rubredoxin-related maturation factor guarantees metal cofactor integrity during aerobic biosynthesis of membrane-bound [NiFe] hydrogenase.

Authors:  Johannes Fritsch; Elisabeth Siebert; Jacqueline Priebe; Ingo Zebger; Friedhelm Lendzian; Christian Teutloff; Bärbel Friedrich; Oliver Lenz
Journal:  J Biol Chem       Date:  2014-01-21       Impact factor: 5.157

Review 6.  Structure, function and biosynthesis of O₂-tolerant hydrogenases.

Authors:  Johannes Fritsch; Oliver Lenz; Bärbel Friedrich
Journal:  Nat Rev Microbiol       Date:  2013-02       Impact factor: 60.633

7.  A kinetic and thermodynamic understanding of O2 tolerance in [NiFe]-hydrogenases.

Authors:  James A Cracknell; Annemarie F Wait; Oliver Lenz; Bärbel Friedrich; Fraser A Armstrong
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-23       Impact factor: 11.205

8.  Immobilization of the hyperthermophilic hydrogenase from Aquifex aeolicus bacterium onto gold and carbon nanotube electrodes for efficient H2 oxidation.

Authors:  Xiaojun Luo; Myriam Brugna; Pascale Tron-Infossi; Marie Thérèse Giudici-Orticoni; Elisabeth Lojou
Journal:  J Biol Inorg Chem       Date:  2009-07-22       Impact factor: 3.358

9.  How Escherichia coli is equipped to oxidize hydrogen under different redox conditions.

Authors:  Michael J Lukey; Alison Parkin; Maxie M Roessler; Bonnie J Murphy; Jeffrey Harmer; Tracy Palmer; Frank Sargent; Fraser A Armstrong
Journal:  J Biol Chem       Date:  2009-11-16       Impact factor: 5.157

10.  Overexpression, isolation, and spectroscopic characterization of the bidirectional [NiFe] hydrogenase from Synechocystis sp. PCC 6803.

Authors:  Frauke Germer; Ingo Zebger; Miguel Saggu; Friedhelm Lendzian; Rüdiger Schulz; Jens Appel
Journal:  J Biol Chem       Date:  2009-09-28       Impact factor: 5.157

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