Literature DB >> 19917611

How Escherichia coli is equipped to oxidize hydrogen under different redox conditions.

Michael J Lukey1, Alison Parkin, Maxie M Roessler, Bonnie J Murphy, Jeffrey Harmer, Tracy Palmer, Frank Sargent, Fraser A Armstrong.   

Abstract

The enterobacterium Escherichia coli synthesizes two H(2) uptake enzymes, Hyd-1 and Hyd-2. We show using precise electrochemical kinetic measurements that the properties of Hyd-1 and Hyd-2 contrast strikingly, and may be individually optimized to function under distinct environmental conditions. Hyd-2 is well suited for fast and efficient catalysis in more reducing environments, to the extent that in vitro it behaves as a bidirectional hydrogenase. In contrast, Hyd-1 is active for H(2) oxidation under more oxidizing conditions and cannot function in reverse. Importantly, Hyd-1 is O(2) tolerant and can oxidize H(2) in the presence of air, whereas Hyd-2 is ineffective for H(2) oxidation under aerobic conditions. The results have direct relevance for physiological roles of Hyd-1 and Hyd-2, which are expressed in different phases of growth. The properties that we report suggest distinct technological applications of these contrasting enzymes.

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Year:  2009        PMID: 19917611      PMCID: PMC2823535          DOI: 10.1074/jbc.M109.067751

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  51 in total

Review 1.  Direct electrochemistry of redox enzymes as a tool for mechanistic studies.

Authors:  Christophe Léger; Patrick Bertrand
Journal:  Chem Rev       Date:  2008-07       Impact factor: 60.622

2.  Electron paramagnetic resonance (EPR) studies on hydrogenase-1 (HYD1) purified from a mutant strain (AP6) of Escherichia coli enhanced in HYD1.

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Journal:  Biochem Biophys Res Commun       Date:  1996-10-03       Impact factor: 3.575

3.  Effects of sigmaS and the transcriptional activator AppY on induction of the Escherichia coli hya and cbdAB-appA operons in response to carbon and phosphate starvation.

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Journal:  J Bacteriol       Date:  1997-04       Impact factor: 3.490

4.  Electron paramagnetic resonance studies on the mechanism of activation and the catalytic cycle of the nickel-containing hydrogenase from Desulfovibrio gigas.

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Journal:  J Biol Chem       Date:  1985-07-25       Impact factor: 5.157

Review 5.  [NiFe]-hydrogenases: spectroscopic and electrochemical definition of reactions and intermediates.

Authors:  Fraser A Armstrong; Simon P J Albracht
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2005-04-15       Impact factor: 4.226

6.  Characterization of the nickel-iron periplasmic hydrogenase from Desulfovibrio fructosovorans.

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Journal:  Eur J Biochem       Date:  1990-02-14

7.  Nickel-containing hydrogenase isoenzymes from anaerobically grown Escherichia coli K-12.

Authors:  S P Ballantine; D H Boxer
Journal:  J Bacteriol       Date:  1985-08       Impact factor: 3.490

8.  A kinetic and thermodynamic understanding of O2 tolerance in [NiFe]-hydrogenases.

Authors:  James A Cracknell; Annemarie F Wait; Oliver Lenz; Bärbel Friedrich; Fraser A Armstrong
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-23       Impact factor: 11.205

9.  Purification of the membrane-bound hydrogenase of Escherichia coli.

Authors:  M W Adams; D O Hall
Journal:  Biochem J       Date:  1979-10-01       Impact factor: 3.857

10.  Electrochemical definitions of O2 sensitivity and oxidative inactivation in hydrogenases.

Authors:  Kylie A Vincent; Alison Parkin; Oliver Lenz; Simon P J Albracht; Juan C Fontecilla-Camps; Richard Cammack; Bärbel Friedrich; Fraser A Armstrong
Journal:  J Am Chem Soc       Date:  2005-12-28       Impact factor: 15.419

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  55 in total

1.  Host hydrogen rather than that produced by the pathogen is important for Salmonella enterica serovar Typhimurium virulence.

Authors:  Reena Lamichhane-Khadka; Stéphane L Benoit; Erica F Miller-Parks; Robert J Maier
Journal:  Infect Immun       Date:  2014-11-03       Impact factor: 3.441

2.  Amino acid modified Ni catalyst exhibits reversible H2 oxidation/production over a broad pH range at elevated temperatures.

Authors:  Arnab Dutta; Daniel L DuBois; John A S Roberts; Wendy J Shaw
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-03       Impact factor: 11.205

3.  Physiology and bioenergetics of [NiFe]-hydrogenase 2-catalyzed H2-consuming and H2-producing reactions in Escherichia coli.

Authors:  Constanze Pinske; Monique Jaroschinsky; Sabine Linek; Ciarán L Kelly; Frank Sargent; R Gary Sawers
Journal:  J Bacteriol       Date:  2014-11-03       Impact factor: 3.490

4.  Improved purification, crystallization and crystallographic study of Hyd-2-type [NiFe]-hydrogenase from Citrobacter sp. S-77.

Authors:  Noor Dina Muhd Noor; Koji Nishikawa; Hirofumi Nishihara; Ki Seok Yoon; Seiji Ogo; Yoshiki Higuchi
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-01-01       Impact factor: 1.056

5.  Dissection of the Hydrogen Metabolism of the Enterobacterium Trabulsiella guamensis: Identification of a Formate-Dependent and Essential Formate Hydrogenlyase Complex Exhibiting Phylogenetic Similarity to Complex I.

Authors:  Ute Lindenstrauß; Constanze Pinske
Journal:  J Bacteriol       Date:  2019-05-22       Impact factor: 3.490

6.  The crystal structure of an oxygen-tolerant hydrogenase uncovers a novel iron-sulphur centre.

Authors:  Johannes Fritsch; Patrick Scheerer; Stefan Frielingsdorf; Sebastian Kroschinsky; Bärbel Friedrich; Oliver Lenz; Christian M T Spahn
Journal:  Nature       Date:  2011-10-16       Impact factor: 49.962

7.  Structural basis for a [4Fe-3S] cluster in the oxygen-tolerant membrane-bound [NiFe]-hydrogenase.

Authors:  Yasuhito Shomura; Ki-Seok Yoon; Hirofumi Nishihara; Yoshiki Higuchi
Journal:  Nature       Date:  2011-10-16       Impact factor: 49.962

8.  Reversibility and efficiency in electrocatalytic energy conversion and lessons from enzymes.

Authors:  Fraser A Armstrong; Judy Hirst
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-15       Impact factor: 11.205

Review 9.  Structure, function and biosynthesis of O₂-tolerant hydrogenases.

Authors:  Johannes Fritsch; Oliver Lenz; Bärbel Friedrich
Journal:  Nat Rev Microbiol       Date:  2013-02       Impact factor: 60.633

10.  Distribution analysis of hydrogenases in surface waters of marine and freshwater environments.

Authors:  Martin Barz; Christian Beimgraben; Torsten Staller; Frauke Germer; Friederike Opitz; Claudia Marquardt; Christoph Schwarz; Kirstin Gutekunst; Klaus Heinrich Vanselow; Ruth Schmitz; Julie LaRoche; Rüdiger Schulz; Jens Appel
Journal:  PLoS One       Date:  2010-11-05       Impact factor: 3.240

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