Literature DB >> 19292880

Mechanism of mild acid hydrolysis of galactan polysaccharides with highly ordered disaccharide repeats leading to a complete series of exclusively odd-numbered oligosaccharides.

Bo Yang1, Guangli Yu, Xia Zhao, Guangling Jiao, Sumei Ren, Wengang Chai.   

Abstract

Sulfated galactan kappa-carrageenan is a linear polysaccharide with a repeating disaccharide sequence of alternating 4-sulfated 3-linked galactose and 4-linked 3,6-anhydrogalactose units. In contrast to many examples of chemical hydrolysis of polysaccharides, mild acid treatment of kappa-carrageenan resulted in facile and highly specific cleavage. In this article, we report the identification, by various MS and chromatographic techniques, of an unexpected series of exclusively odd-numbered oligosaccharide fragments from its hydrolytic products. Detailed sequence analysis of the products indicated that all the oligosaccharide fragments have the 4-sulfated 3-linked galactose residues at both the reducing and the nonreducing ends. Further detailed investigation and analysis suggested that these odd-numbered oligosaccharides were derived from two-step cleavages of the glycosidic bonds on either sides of the 3,6-anhydrogalactose residues. Neutral galactan agarose also contains 3,6-anhydrogalactose and has a similar backbone sequence, and exhibited similar results upon mild acid hydrolysis. It is highly unusual to obtain exclusively odd-numbered oligosaccharides from polysaccharides composed of ordered disaccharide repeats.

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Year:  2009        PMID: 19292880     DOI: 10.1111/j.1742-4658.2009.06947.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  21 in total

1.  Hyper-production and characterization of the ι-carrageenase useful for ι-carrageenan oligosaccharide production from a deep-sea bacterium, Microbulbifer thermotolerans JAMB-A94T, and insight into the unusual catalytic mechanism.

Authors:  Yuji Hatada; Masahiro Mizuno; Zhijun Li; Yukari Ohta
Journal:  Mar Biotechnol (NY)       Date:  2010-08-05       Impact factor: 3.619

Review 2.  Analysis of carbohydrates and glycoconjugates by matrix-assisted laser desorption/ionization mass spectrometry: an update for 2009-2010.

Authors:  David J Harvey
Journal:  Mass Spectrom Rev       Date:  2014-05-26       Impact factor: 10.946

3.  A Repeating Sulfated Galactan Motif Resuscitates Dormant Micrococcus luteus Bacteria.

Authors:  Thomas Böttcher; Dávid Szamosvári; Jon Clardy
Journal:  Appl Environ Microbiol       Date:  2018-06-18       Impact factor: 4.792

4.  ESI-MS differential fragmentation of positional isomers of sulfated oligosaccharides derived from carrageenans and agarans.

Authors:  Alan G Gonçalves; Diogo R B Ducatti; T Bruce Grindley; M Eugênia R Duarte; Miguel D Noseda
Journal:  J Am Soc Mass Spectrom       Date:  2010-04-07       Impact factor: 3.109

Review 5.  Hyphenated techniques for the analysis of heparin and heparan sulfate.

Authors:  Bo Yang; Kemal Solakyildirim; Yuqing Chang; Robert J Linhardt
Journal:  Anal Bioanal Chem       Date:  2010-09-19       Impact factor: 4.142

6.  Biological upgrading of 3,6-anhydro-L-galactose from agarose to a new platform chemical.

Authors:  Dong Hyun Kim; Jing-Jing Liu; Jae Won Lee; Jeffrey G Pelton; Eun Ju Yun; Sora Yu; Yong-Su Jin; Kyoung Heon Kim
Journal:  Green Chem       Date:  2020-02-24       Impact factor: 10.182

7.  A novel agarolytic β-galactosidase acts on agarooligosaccharides for complete hydrolysis of agarose into monomers.

Authors:  Chan Hyoung Lee; Hee Taek Kim; Eun Ju Yun; Ah Reum Lee; Sa Rang Kim; Jae-Han Kim; In-Geol Choi; Kyoung Heon Kim
Journal:  Appl Environ Microbiol       Date:  2014-07-18       Impact factor: 4.792

8.  On-line separation and characterization of hyaluronan oligosaccharides derived from radical depolymerization.

Authors:  Xue Zhao; Bo Yang; Lingyun Li; Fuming Zhang; Robert J Linhardt
Journal:  Carbohydr Polym       Date:  2013-04-15       Impact factor: 9.381

9.  Purification, cloning, characterization and essential amino acid residues analysis of a new ι-carrageenase from Cellulophaga sp. QY3.

Authors:  Su Ma; Gaofei Duan; Wengang Chai; Cunliang Geng; Yulong Tan; Lushan Wang; Frédéric Le Sourd; Gurvan Michel; Wengong Yu; Feng Han
Journal:  PLoS One       Date:  2013-05-31       Impact factor: 3.240

10.  Profiling pneumococcal type 3-derived oligosaccharides by high resolution liquid chromatography-tandem mass spectrometry.

Authors:  Guoyun Li; Lingyun Li; Changhu Xue; Dustin Middleton; Robert J Linhardt; Fikri Y Avci
Journal:  J Chromatogr A       Date:  2015-04-11       Impact factor: 4.759

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