Literature DB >> 19292670

A student team in a University of Michigan biomedical engineering design course constructs a microfluidic bioreactor for studies of zebrafish development.

Yu-chi Shen1, David Li, Ali Al-Shoaibi, Tom Bersano-Begey, Hao Chen, Shahid Ali, Betsy Flak, Catherine Perrin, Max Winslow, Harsh Shah, Poornapriya Ramamurthy, Rachael H Schmedlen, Shuichi Takayama, Kate F Barald.   

Abstract

The zebrafish is a valuable model for teaching developmental, molecular, and cell biology; aquatic sciences; comparative anatomy; physiology; and genetics. Here we demonstrate that zebrafish provide an excellent model system to teach engineering principles. A seven-member undergraduate team in a biomedical engineering class designed, built, and tested a zebrafish microfluidic bioreactor applying microfluidics, an emerging engineering technology, to study zebrafish development. During the semester, students learned engineering and biology experimental design, chip microfabrication, mathematical modeling, zebrafish husbandry, principles of developmental biology, fluid dynamics, microscopy, and basic molecular biology theory and techniques. The team worked to maximize each person's contribution and presented weekly written and oral reports. Two postdoctoral fellows, a graduate student, and three faculty instructors coordinated and directed the team in an optimal blending of engineering, molecular, and developmental biology skill sets. The students presented two posters, including one at the Zebrafish meetings in Madison, Wisconsin (June 2008).

Entities:  

Mesh:

Year:  2009        PMID: 19292670      PMCID: PMC2777541          DOI: 10.1089/zeb.2008.0572

Source DB:  PubMed          Journal:  Zebrafish        ISSN: 1545-8547            Impact factor:   1.985


  40 in total

Review 1.  Analyzing morphogenetic cell behaviors in vitally stained zebrafish embryos.

Authors:  M S Cooper; L A D'Amico; C A Henry
Journal:  Methods Mol Biol       Date:  1999

2.  Expression cloning of noggin, a new dorsalizing factor localized to the Spemann organizer in Xenopus embryos.

Authors:  W C Smith; R M Harland
Journal:  Cell       Date:  1992-09-04       Impact factor: 41.582

3.  Efficient formation of uniform-sized embryoid bodies using a compartmentalized microchannel device.

Authors:  Yu-suke Torisawa; Bor-han Chueh; Dongeun Huh; Poornapriya Ramamurthy; Therese M Roth; Kate F Barald; Shuichi Takayama
Journal:  Lab Chip       Date:  2007-04-20       Impact factor: 6.799

4.  Microfluidic self-assembly of live Drosophila embryos for versatile high-throughput analysis of embryonic morphogenesis.

Authors:  Gabriel T Dagani; Kate Monzo; Jean R Fakhoury; Chung-Chu Chen; John C Sisson; Xiaojing Zhang
Journal:  Biomed Microdevices       Date:  2007-10       Impact factor: 2.838

5.  Rapid Prototyping of Microfluidic Systems in Poly(dimethylsiloxane).

Authors:  D C Duffy; J C McDonald; O J Schueller; G M Whitesides
Journal:  Anal Chem       Date:  1998-12-01       Impact factor: 6.986

6.  Cloning and expression analysis of the chick DAN gene, an antagonist of the BMP family of growth factors.

Authors:  Lisa M Gerlach-Bank; Amanda D Ellis; Bridgette Noonen; Kate F Barald
Journal:  Dev Dyn       Date:  2002-05       Impact factor: 3.780

7.  Immortalized mouse inner ear cell lines demonstrate a role for chemokines in promoting the growth of developing statoacoustic ganglion neurons.

Authors:  Lynne M Bianchi; Zeeba Daruwalla; Therese M Roth; Naweah P Attia; Nicholas W Lukacs; Ayo-Lynn Richards; Ian O White; Susan J Allen; Kate F Barald
Journal:  J Assoc Res Otolaryngol       Date:  2005-12

8.  Expression of ZIC genes in the development of the chick inner ear and nervous system.

Authors:  Stephen J Warner; Mary R Hutson; Seung-Ha Oh; Lisa M Gerlach-Bank; Margaret I Lomax; Kate F Barald
Journal:  Dev Dyn       Date:  2003-04       Impact factor: 3.780

9.  Expression of selected apoptosis related genes, MIF, IGIF and TNF alpha, during retinoic acid-induced neural differentiation in murine embryonic stem cells.

Authors:  Suparna A Sarkar; Raghubir P Sharma
Journal:  Cell Struct Funct       Date:  2002-04       Impact factor: 2.212

10.  Effect of pH on pentachlorophenol toxicity to embryos and larvae of zebrafish (Brachydanio rerio).

Authors:  G Dave
Journal:  Bull Environ Contam Toxicol       Date:  1984-11       Impact factor: 2.151

View more
  7 in total

1.  Microstructured Surface Arrays for Injection of Zebrafish Larvae.

Authors:  Felix Ellett; Daniel Irimia
Journal:  Zebrafish       Date:  2017-02-02       Impact factor: 1.985

Review 2.  "Learning on a chip:" Microfluidics for formal and informal science education.

Authors:  Darius G Rackus; Ingmar H Riedel-Kruse; Nicole Pamme
Journal:  Biomicrofluidics       Date:  2019-07-09       Impact factor: 2.800

Review 3.  Microfluidic tools for developmental studies of small model organisms--nematodes, fruit flies, and zebrafish.

Authors:  Hyundoo Hwang; Hang Lu
Journal:  Biotechnol J       Date:  2012-11-19       Impact factor: 4.677

4.  Comparative toxicity of lead (Pb(2+)), copper (Cu(2+)), and mixtures of lead and copper to zebrafish embryos on a microfluidic chip.

Authors:  Yinbao Li; Xiujuan Yang; Zuanguang Chen; Beibei Zhang; Jianbin Pan; Xinchun Li; Fan Yang; Duanping Sun
Journal:  Biomicrofluidics       Date:  2015-03-17       Impact factor: 2.800

5.  Microstructured Devices for Optimized Microinjection and Imaging of Zebrafish Larvae.

Authors:  Felix Ellett; Daniel Irimia
Journal:  J Vis Exp       Date:  2017-12-08       Impact factor: 1.355

6.  An integrated microfluidic array system for evaluating toxicity and teratogenicity of drugs on embryonic zebrafish developmental dynamics.

Authors:  Fan Yang; Zuanguang Chen; Jianbin Pan; Xinchun Li; Jun Feng; Hui Yang
Journal:  Biomicrofluidics       Date:  2011-06-27       Impact factor: 2.800

7.  Zebrafish on a chip: a novel platform for real-time monitoring of drug-induced developmental toxicity.

Authors:  Yinbao Li; Fan Yang; Zuanguang Chen; Lijuan Shi; Beibei Zhang; Jianbin Pan; Xinchun Li; Duanping Sun; Hongzhi Yang
Journal:  PLoS One       Date:  2014-04-14       Impact factor: 3.240

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.