Literature DB >> 19290607

Confinement spectroscopy: probing single DNA molecules with tapered nanochannels.

Fredrik Persson1, Pawel Utko, Walter Reisner, Niels B Larsen, Anders Kristensen.   

Abstract

We demonstrate a confinement spectroscopy technique capable of probing small conformational changes of unanchored single DNA molecules in a manner analogous to force spectroscopy, in the regime corresponding to femtonewton forces. In contrast to force spectroscopy, various structural forms of DNA can easily be probed, as indicated by experiments on linear and circular DNA. The extension of circular DNA is found to scale according to the de Gennes exponent, unlike for linear DNA.

Mesh:

Substances:

Year:  2009        PMID: 19290607     DOI: 10.1021/nl803030e

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  32 in total

1.  Fluctuation modes of nanoconfined DNA.

Authors:  Alena Karpusenko; Joshua H Carpenter; Chunda Zhou; Shuang Fang Lim; Junhan Pan; Robert Riehn
Journal:  J Appl Phys       Date:  2012-01-17       Impact factor: 2.546

2.  Rigorous study of molecular dynamics of a single dsDNA confined in a nanochannel: Introduction of a critical mobility behaviour.

Authors:  Marzieh Alishahi; Reza Kamali; Omid Abouali
Journal:  Eur Phys J E Soft Matter       Date:  2015-08-31       Impact factor: 1.890

3.  Electro-entropic excluded volume effects on DNA looping and relaxation in nanochannels.

Authors:  Yeng-Long Chen
Journal:  Biomicrofluidics       Date:  2013-10-22       Impact factor: 2.800

4.  Macromolecular crowding induced elongation and compaction of single DNA molecules confined in a nanochannel.

Authors:  Ce Zhang; Pei Ge Shao; Jeroen A van Kan; Johan R C van der Maarel
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-16       Impact factor: 11.205

5.  Probing transient protein-mediated DNA linkages using nanoconfinement.

Authors:  Maedeh Roushan; Parminder Kaur; Alena Karpusenko; Preston J Countryman; Carlos P Ortiz; Shuang Fang Lim; Hong Wang; Robert Riehn
Journal:  Biomicrofluidics       Date:  2014-06-12       Impact factor: 2.800

6.  DNA Brushing Shoulders: Targeted Looping and Scanning of Large DNA Strands.

Authors:  Zubair Azad; Maedeh Roushan; Robert Riehn
Journal:  Nano Lett       Date:  2015-07-13       Impact factor: 11.189

7.  Nanoplumbing with 2D Metamaterials.

Authors:  Saroj Dangi; Robert Riehn
Journal:  Small       Date:  2018-12-11       Impact factor: 13.281

8.  Optofluidic chips with nanochannels for dynamic molecular detection using enhanced fluorescence.

Authors:  P A Postigo; R Alvaro; A Juarros; S Merino
Journal:  Biomed Opt Express       Date:  2016-08-09       Impact factor: 3.732

9.  Translocation of a granular chain in a horizontally vibrated saw-tooth channel.

Authors:  Fariba Mortazavi; Mehdi Habibi; Ehsan Nedaaee Oskoee
Journal:  Eur Phys J E Soft Matter       Date:  2016-10-21       Impact factor: 1.890

10.  Measuring the wall depletion length of nanoconfined DNA.

Authors:  Aditya Bikram Bhandari; Jeffrey G Reifenberger; Hui-Min Chuang; Han Cao; Kevin D Dorfman
Journal:  J Chem Phys       Date:  2018-09-14       Impact factor: 3.488

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.