Literature DB >> 19289208

Methods for measuring the thermodynamic stability of membrane proteins.

Heedeok Hong1, Nathan H Joh, James U Bowie, Lukas K Tamm.   

Abstract

Learning how amino acid sequences define protein structure has been a major challenge for molecular biology since the first protein structures were determined in the 1960s. In contrast to the staggering progress with soluble proteins, investigations of membrane protein folding have long been hampered by the lack of high-resolution structures and the technical challenges associated with studying the folding process in vitro. In the past decade, however, there has been an explosion of new membrane protein structures and a slower but notable increase in efforts to study the factors that define these structures. Here we review the methods that have been used to evaluate the thermodynamic stability of membrane proteins and provide some salient examples of how the methods have been used to begin to understand the energetics of membrane protein folding.

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Year:  2009        PMID: 19289208     DOI: 10.1016/S0076-6879(08)04208-0

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  40 in total

1.  Predicting three-dimensional structures of transmembrane domains of β-barrel membrane proteins.

Authors:  Hammad Naveed; Yun Xu; Ronald Jackups; Jie Liang
Journal:  J Am Chem Soc       Date:  2012-01-12       Impact factor: 15.419

2.  Revisiting the folding kinetics of bacteriorhodopsin.

Authors:  Jonathan P Schlebach; Zheng Cao; James U Bowie; Chiwook Park
Journal:  Protein Sci       Date:  2011-12-05       Impact factor: 6.725

3.  Assembly of the m2 tetramer is strongly modulated by lipid chain length.

Authors:  Sandra Schick; Lirong Chen; Edwin Li; Janice Lin; Ingo Köper; Kalina Hristova
Journal:  Biophys J       Date:  2010-09-22       Impact factor: 4.033

4.  Method to measure strong protein-protein interactions in lipid bilayers using a steric trap.

Authors:  Heedeok Hong; Tracy M Blois; Zheng Cao; James U Bowie
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

Review 5.  Membrane protein folding: how important are hydrogen bonds?

Authors:  James U Bowie
Journal:  Curr Opin Struct Biol       Date:  2010-11-12       Impact factor: 6.809

Review 6.  Protein folding in membranes.

Authors:  Sebastian Fiedler; Jana Broecker; Sandro Keller
Journal:  Cell Mol Life Sci       Date:  2010-01-27       Impact factor: 9.261

7.  Predicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins.

Authors:  Hammad Naveed; Ronald Jackups; Jie Liang
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-21       Impact factor: 11.205

8.  Quantifying the Interaction between EGFR Dimers and Grb2 in Live Cells.

Authors:  Nuala Del Piccolo; Kalina Hristova
Journal:  Biophys J       Date:  2017-07-19       Impact factor: 4.033

9.  Cooperative folding of a polytopic α-helical membrane protein involves a compact N-terminal nucleus and nonnative loops.

Authors:  Wojciech Paslawski; Ove K Lillelund; Julie Veje Kristensen; Nicholas P Schafer; Rosanna P Baker; Sinisa Urban; Daniel E Otzen
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-08       Impact factor: 11.205

Review 10.  Design of self-assembling transmembrane helical bundles to elucidate principles required for membrane protein folding and ion transport.

Authors:  Nathan H Joh; Gevorg Grigoryan; Yibing Wu; William F DeGrado
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-08-05       Impact factor: 6.237

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