Literature DB >> 19277664

A novel polyketide biosynthesis gene cluster is involved in fruiting body morphogenesis in the filamentous fungi Sordaria macrospora and Neurospora crassa.

Minou Nowrousian1.   

Abstract

During fungal fruiting body development, hyphae aggregate to form multicellular structures that protect and disperse the sexual spores. Analysis of microarray data revealed a gene cluster strongly upregulated during fruiting body development in the ascomycete Sordaria macrospora. Real time PCR analysis showed that the genes from the orthologous cluster in Neurospora crassa are also upregulated during development. The cluster encodes putative polyketide biosynthesis enzymes, including a reducing polyketide synthase. Analysis of knockout strains of a predicted dehydrogenase gene from the cluster showed that mutants in N. crassa and S. macrospora are delayed in fruiting body formation. In addition to the upregulated cluster, the N. crassa genome comprises another cluster containing a polyketide synthase gene, and five additional reducing polyketide synthase (rpks) genes that are not part of clusters. To study the role of these genes in sexual development, expression of the predicted rpks genes in S. macrospora (five genes) and N. crassa (six genes) was analyzed; all but one are upregulated during sexual development. Analysis of knockout strains for the N. crassa rpks genes showed that one of them is essential for fruiting body formation. These data indicate that polyketides produced by RPKSs are involved in sexual development in filamentous ascomycetes.

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Year:  2009        PMID: 19277664     DOI: 10.1007/s00294-009-0236-z

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  43 in total

1.  Novel polyketide synthase from Nectria haematococca.

Authors:  Stephane Graziani; Christelle Vasnier; Marie-Josee Daboussi
Journal:  Appl Environ Microbiol       Date:  2004-05       Impact factor: 4.792

2.  Improved prediction of signal peptides: SignalP 3.0.

Authors:  Jannick Dyrløv Bendtsen; Henrik Nielsen; Gunnar von Heijne; Søren Brunak
Journal:  J Mol Biol       Date:  2004-07-16       Impact factor: 5.469

Review 3.  Polyketide and nonribosomal peptide antibiotics: modularity and versatility.

Authors:  Christopher T Walsh
Journal:  Science       Date:  2004-03-19       Impact factor: 47.728

4.  A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors.

Authors:  Hildur V Colot; Gyungsoon Park; Gloria E Turner; Carol Ringelberg; Christopher M Crew; Liubov Litvinkova; Richard L Weiss; Katherine A Borkovich; Jay C Dunlap
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-26       Impact factor: 11.205

5.  Genomics-driven discovery of PKS-NRPS hybrid metabolites from Aspergillus nidulans.

Authors:  Sebastian Bergmann; Julia Schümann; Kirstin Scherlach; Corinna Lange; Axel A Brakhage; Christian Hertweck
Journal:  Nat Chem Biol       Date:  2007-03-18       Impact factor: 15.040

6.  Regulation of sexual reproduction in Gibberella zeae (Fusarium roxeum "graminearum") by F-2 (Zearalenone).

Authors:  J C Wolf; C J Mirocha
Journal:  Can J Microbiol       Date:  1973-06       Impact factor: 2.419

7.  Cross-species microarray hybridization to identify developmentally regulated genes in the filamentous fungus Sordaria macrospora.

Authors:  Minou Nowrousian; Carol Ringelberg; Jay C Dunlap; Jennifer J Loros; Ulrich Kück
Journal:  Mol Genet Genomics       Date:  2005-03-19       Impact factor: 3.291

8.  A mitogen-activated protein kinase pathway essential for mating and contributing to vegetative growth in Neurospora crassa.

Authors:  Dan Li; Piotr Bobrowicz; Heather H Wilkinson; Daniel J Ebbole
Journal:  Genetics       Date:  2005-03-31       Impact factor: 4.562

9.  The genome sequence of the rice blast fungus Magnaporthe grisea.

Authors:  Ralph A Dean; Nicholas J Talbot; Daniel J Ebbole; Mark L Farman; Thomas K Mitchell; Marc J Orbach; Michael Thon; Resham Kulkarni; Jin-Rong Xu; Huaqin Pan; Nick D Read; Yong-Hwan Lee; Ignazio Carbone; Doug Brown; Yeon Yee Oh; Nicole Donofrio; Jun Seop Jeong; Darren M Soanes; Slavica Djonovic; Elena Kolomiets; Cathryn Rehmeyer; Weixi Li; Michael Harding; Soonok Kim; Marc-Henri Lebrun; Heidi Bohnert; Sean Coughlan; Jonathan Butler; Sarah Calvo; Li-Jun Ma; Robert Nicol; Seth Purcell; Chad Nusbaum; James E Galagan; Bruce W Birren
Journal:  Nature       Date:  2005-04-21       Impact factor: 49.962

10.  Comparative sequence analysis of Sordaria macrospora and Neurospora crassa as a means to improve genome annotation.

Authors:  Minou Nowrousian; Christian Würtz; Stefanie Pöggeler; Ulrich Kück
Journal:  Fungal Genet Biol       Date:  2004-03       Impact factor: 3.495

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  11 in total

1.  ATP-citrate lyase is required for production of cytosolic acetyl coenzyme A and development in Aspergillus nidulans.

Authors:  Michael J Hynes; Sandra L Murray
Journal:  Eukaryot Cell       Date:  2010-05-21

2.  De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis.

Authors:  Minou Nowrousian; Jason E Stajich; Meiling Chu; Ines Engh; Eric Espagne; Karen Halliday; Jens Kamerewerd; Frank Kempken; Birgit Knab; Hsiao-Che Kuo; Heinz D Osiewacz; Stefanie Pöggeler; Nick D Read; Stephan Seiler; Kristina M Smith; Denise Zickler; Ulrich Kück; Michael Freitag
Journal:  PLoS Genet       Date:  2010-04-08       Impact factor: 5.917

3.  Breaking the silence: protein stabilization uncovers silenced biosynthetic gene clusters in the fungus Aspergillus nidulans.

Authors:  Jennifer Gerke; Ozgür Bayram; Kirstin Feussner; Manuel Landesfeind; Ekaterina Shelest; Ivo Feussner; Gerhard H Braus
Journal:  Appl Environ Microbiol       Date:  2012-09-21       Impact factor: 4.792

4.  The polyketide synthase gene pks4 of Trichoderma reesei provides pigmentation and stress resistance.

Authors:  Lea Atanasova; Benjamin P Knox; Christian P Kubicek; Irina S Druzhinina; Scott E Baker
Journal:  Eukaryot Cell       Date:  2013-09-13

5.  Combining laser microdissection and RNA-seq to chart the transcriptional landscape of fungal development.

Authors:  Ines Teichert; Gabriele Wolff; Ulrich Kück; Minou Nowrousian
Journal:  BMC Genomics       Date:  2012-09-27       Impact factor: 3.969

6.  Functional Analysis of Developmentally Regulated Genes chs7 and sec22 in the Ascomycete Sordaria macrospora.

Authors:  Stefanie Traeger; Minou Nowrousian
Journal:  G3 (Bethesda)       Date:  2015-04-14       Impact factor: 3.154

7.  Neurospora crassa female development requires the PACC and other signal transduction pathways, transcription factors, chromatin remodeling, cell-to-cell fusion, and autophagy.

Authors:  Jennifer L Chinnici; Ci Fu; Lauren M Caccamise; Jason W Arnold; Stephen J Free
Journal:  PLoS One       Date:  2014-10-21       Impact factor: 3.240

Review 8.  Sordaria macrospora: 25 years as a model organism for studying the molecular mechanisms of fruiting body development.

Authors:  Ines Teichert; Stefanie Pöggeler; Minou Nowrousian
Journal:  Appl Microbiol Biotechnol       Date:  2020-03-11       Impact factor: 4.813

9.  Deletion and gene expression analyses define the paxilline biosynthetic gene cluster in Penicillium paxilli.

Authors:  Barry Scott; Carolyn A Young; Sanjay Saikia; Lisa K McMillan; Brendon J Monahan; Albert Koulman; Jonathan Astin; Carla J Eaton; Andrea Bryant; Ruth E Wrenn; Sarah C Finch; Brian A Tapper; Emily J Parker; Geoffrey B Jameson
Journal:  Toxins (Basel)       Date:  2013-08-14       Impact factor: 4.546

10.  Analyses of expressed sequence tags in Neurospora reveal rapid evolution of genes associated with the early stages of sexual reproduction in fungi.

Authors:  Kristiina Nygren; Andreas Wallberg; Nicklas Samils; Jason E Stajich; Jeffrey P Townsend; Magnus Karlsson; Hanna Johannesson
Journal:  BMC Evol Biol       Date:  2012-11-27       Impact factor: 3.260

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