Literature DB >> 19277590

Gene expression profiling of leukemia stem cells.

Andrei V Krivtsov1, Yingzi Wang, Zhaohui Feng, Scott A Armstrong.   

Abstract

Characterization of gene expression programs and pathways important for normal and cancer stem cells has become an active area of investigation. Microarray analysis of various cell populations provides an opportunity to assess genomewide expression programs to define cellular identity and to potentially identify pathways activated in various stem cells. Here we describe methods to isolate a leukemia stem cell population, amplify RNA, and perform microarray analyses.

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Year:  2009        PMID： 19277590      PMCID： PMC3339407          DOI： 10.1007/978-1-59745-418-6_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  10 in total

1.  A clonogenic common myeloid progenitor that gives rise to all myeloid lineages.

Authors:  K Akashi; D Traver; T Miyamoto; I L Weissman
Journal:  Nature       Date:  2000-03-09       Impact factor: 49.962

2.  Myeloerythroid-restricted progenitors are sufficient to confer radioprotection and provide the majority of day 8 CFU-S.

Authors:  Thanyaphong Na Nakorn; David Traver; Irving L Weissman; Koichi Akashi
Journal:  J Clin Invest       Date:  2002-06       Impact factor: 14.808

3.  Similar MLL-associated leukemias arising from self-renewing stem cells and short-lived myeloid progenitors.

Authors:  Antonio Cozzio; Emmanuelle Passegué; Paul M Ayton; Holger Karsunky; Michael L Cleary; Irving L Weissman
Journal:  Genes Dev       Date:  2003-12-15       Impact factor: 11.361

4.  Amplified RNA synthesized from limited quantities of heterogeneous cDNA.

Authors:  R N Van Gelder; M E von Zastrow; A Yool; W C Dement; J D Barchas; J H Eberwine
Journal:  Proc Natl Acad Sci U S A       Date:  1990-03       Impact factor: 11.205

5.  GenePattern 2.0.

Authors:  Michael Reich; Ted Liefeld; Joshua Gould; Jim Lerner; Pablo Tamayo; Jill P Mesirov
Journal:  Nat Genet       Date:  2006-05       Impact factor: 38.330

6.  Metagene projection for cross-platform, cross-species characterization of global transcriptional states.

Authors:  Pablo Tamayo; Daniel Scanfeld; Benjamin L Ebert; Michael A Gillette; Charles W M Roberts; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-27       Impact factor: 11.205

7.  Molecular classification of cancer: class discovery and class prediction by gene expression monitoring.

Authors:  T R Golub; D K Slonim; P Tamayo; C Huard; M Gaasenbeek; J P Mesirov; H Coller; M L Loh; J R Downing; M A Caligiuri; C D Bloomfield; E S Lander
Journal:  Science       Date:  1999-10-15       Impact factor: 47.728

8.  Transformation from committed progenitor to leukaemia stem cell initiated by MLL-AF9.

Authors:  Andrei V Krivtsov; David Twomey; Zhaohui Feng; Matthew C Stubbs; Yingzi Wang; Joerg Faber; Jason E Levine; Jing Wang; William C Hahn; D Gary Gilliland; Todd R Golub; Scott A Armstrong
Journal:  Nature       Date:  2006-07-16       Impact factor: 49.962

9.  Cluster analysis and display of genome-wide expression patterns.

Authors:  M B Eisen; P T Spellman; P O Brown; D Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-08       Impact factor: 11.205

10.  Use of a recombinant retrovirus to study post-implantation cell lineage in mouse embryos.

Authors:  J R Sanes; J L Rubenstein; J F Nicolas
Journal:  EMBO J       Date:  1986-12-01       Impact factor: 11.598
  10 in total
  6 in total

Review 1.  Identification and targeting leukemia stem cells: The path to the cure for acute myeloid leukemia.

Authors:  Jianbiao Zhou; Wee-Joo Chng
Journal:  World J Stem Cells       Date:  2014-09-26       Impact factor: 5.326

2.  Genetic and pharmacologic inhibition of β-catenin targets imatinib-resistant leukemia stem cells in CML.

Authors:  Florian H Heidel; Lars Bullinger; Zhaohui Feng; Zhu Wang; Tobias A Neff; Lauren Stein; Demetrios Kalaitzidis; Steven W Lane; Scott A Armstrong
Journal:  Cell Stem Cell       Date:  2012-04-06       Impact factor: 24.633

3.  The cell fate determinant Llgl1 influences HSC fitness and prognosis in AML.

Authors:  Florian H Heidel; Lars Bullinger; Patricia Arreba-Tutusaus; Zhu Wang; Julia Gaebel; Carsten Hirt; Dietger Niederwieser; Steven W Lane; Konstanze Döhner; Valera Vasioukhin; Thomas Fischer; Scott A Armstrong
Journal:  J Exp Med       Date:  2012-12-31       Impact factor: 14.307

4.  Expression analysis of multiple myeloma CD138 negative progenitor cells using single molecule microarray readout.

Authors:  Jaroslaw Jacak; Harald Schnidar; Leila Muresan; Gerhard Regl; Annemarie Frischauf; Fritz Aberger; Gerhard J Schütz; Jan Hesse
Journal:  J Biotechnol       Date:  2013-02-14       Impact factor: 3.307

Review 5.  Cancer stem cells in haematological malignancies.

Authors:  Radoslaw Zagozdzon; Jakub Golab
Journal:  Contemp Oncol (Pozn)       Date:  2015

6.  Large scale analysis of signal reachability.

Authors:  Andrei Todor; Haitham Gabr; Alin Dobra; Tamer Kahveci
Journal:  Bioinformatics       Date:  2014-06-15       Impact factor: 6.937
  6 in total

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