Literature DB >> 19272865

Using the stochastic collocation method for the uncertainty quantification of drug concentration due to depot shape variability.

J Samuel Preston1, Tolga Tasdizen, Christi M Terry, Alfred K Cheung, Robert M Kirby.   

Abstract

Numerical simulations entail modeling assumptions that impact outcomes. Therefore, characterizing, in a probabilistic sense, the relationship between the variability of model selection and the variability of outcomes is important. Under certain assumptions, the stochastic collocation method offers a computationally feasible alternative to traditional Monte Carlo approaches for assessing the impact of model and parameter variability. We propose a framework that combines component shape parameterization with the stochastic collocation method to study the effect of drug depot shape variability on the outcome of drug diffusion simulations in a porcine model. We use realistic geometries segmented from MR images and employ level-set techniques to create two alternative univariate shape parameterizations. We demonstrate that once the underlying stochastic process is characterized, quantification of the introduced variability is quite straightforward and provides an important step in the validation and verification process.

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Year:  2008        PMID: 19272865      PMCID: PMC2942026          DOI: 10.1109/TBME.2008.2009882

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  5 in total

1.  3D MRA coronary axis determination using a minimum cost path approach.

Authors:  Onno Wink; Alejandro F Frangi; Bert Verdonck; Max A Viergever; Wiro J Niessen
Journal:  Magn Reson Med       Date:  2002-06       Impact factor: 4.668

2.  User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability.

Authors:  Paul A Yushkevich; Joseph Piven; Heather Cody Hazlett; Rachel Gimpel Smith; Sean Ho; James C Gee; Guido Gerig
Journal:  Neuroimage       Date:  2006-03-20       Impact factor: 6.556

3.  Application of stochastic finite element methods to study the sensitivity of ECG forward modeling to organ conductivity.

Authors:  Sarah E Geneser; Robert M Kirby; Robert S MacLeod
Journal:  IEEE Trans Biomed Eng       Date:  2008-01       Impact factor: 4.538

4.  Cardiac position sensitivity study in the electrocardiographic forward problem using stochastic collocation and boundary element methods.

Authors:  Darrell J Swenson; Sarah E Geneser; Jeroen G Stinstra; Robert M Kirby; Rob S MacLeod
Journal:  Ann Biomed Eng       Date:  2011-09-10       Impact factor: 3.934

5.  Efficacy of local dipyridamole therapy in a porcine model of arteriovenous graft stenosis.

Authors:  T Kuji; T Masaki; K Goteti; L Li; S Zhuplatov; C M Terry; W Zhu; J K Leypoldt; R Rathi; D K Blumenthal; S E Kern; A K Cheung
Journal:  Kidney Int       Date:  2006-05-03       Impact factor: 10.612

  5 in total
  1 in total

Review 1.  Analysis of Uncertainty and Variability in Finite Element Computational Models for Biomedical Engineering: Characterization and Propagation.

Authors:  Nerea Mangado; Gemma Piella; Jérôme Noailly; Jordi Pons-Prats; Miguel Ángel González Ballester
Journal:  Front Bioeng Biotechnol       Date:  2016-11-07
  1 in total

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