Literature DB >> 19255479

Crystallization and preliminary X-ray diffraction analysis of a putative two-domain-type laccase from a metagenome.

Hirofumi Komori1, Kentaro Miyazaki, Yoshiki Higuchi.   

Abstract

A putative two-domain-type laccase retrieved from a metagenome was successfully crystallized using the sitting-drop vapour-diffusion method. Data were collected to a resolution of 1.7 A at 100 K using synchrotron radiation. The crystal belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 74.67, b = 100.95, c = 124.11 A. The self-rotation function showed the presence of a noncrystallographic threefold axis in the structure. The presence of one trimer in the asymmetric unit yielded a Matthews coefficient (V(M)) of 2.05 A(3) Da(-1) and a solvent content of 40%.

Mesh:

Substances:

Year:  2009        PMID: 19255479      PMCID: PMC2650455          DOI: 10.1107/S1744309109002462

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  21 in total

Review 1.  White-rot fungi and their enzymes for the treatment of industrial dye effluents.

Authors:  Dirk Wesenberg; Irene Kyriakides; Spiros N Agathos
Journal:  Biotechnol Adv       Date:  2003-12       Impact factor: 14.227

2.  A hyperthermophilic laccase from Thermus thermophilus HB27.

Authors:  Kentaro Miyazaki
Journal:  Extremophiles       Date:  2005-07-06       Impact factor: 2.395

3.  Functional screening of a metagenomic library for genes involved in microbial degradation of aromatic compounds.

Authors:  Hikaru Suenaga; Tsutomu Ohnuki; Kentaro Miyazaki
Journal:  Environ Microbiol       Date:  2007-09       Impact factor: 5.491

4.  Metagenomic screening for bleomycin resistance genes.

Authors:  Toshio Mori; Shiori Mizuta; Hikaru Suenaga; Kentaro Miyazaki
Journal:  Appl Environ Microbiol       Date:  2008-09-12       Impact factor: 4.792

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  CueO is a multi-copper oxidase that confers copper tolerance in Escherichia coli.

Authors:  G Grass; C Rensing
Journal:  Biochem Biophys Res Commun       Date:  2001-09-07       Impact factor: 3.575

7.  CotA of Bacillus subtilis is a copper-dependent laccase.

Authors:  M F Hullo; I Moszer; A Danchin; I Martin-Verstraete
Journal:  J Bacteriol       Date:  2001-09       Impact factor: 3.490

8.  A metagenomic approach to the identification of UDP-glucose 4-epimerase as a menadione resistance protein.

Authors:  Toshio Mori; Hikaru Suenaga; Kentaro Miyazaki
Journal:  Biosci Biotechnol Biochem       Date:  2008-06-07       Impact factor: 2.043

9.  Role of oxidative enzymatic treatments on enzymatic hydrolysis of softwood.

Authors:  Hetti Palonen; Liisa Viikari
Journal:  Biotechnol Bioeng       Date:  2004-06-05       Impact factor: 4.530

10.  Characterization of SLAC: a small laccase from Streptomyces coelicolor with unprecedented activity.

Authors:  Michael C Machczynski; Erik Vijgenboom; Bart Samyn; Gerard W Canters
Journal:  Protein Sci       Date:  2004-08-04       Impact factor: 6.725

View more
  3 in total

1.  Diversity of two-domain laccase-like multicopper oxidase genes in Streptomyces spp.: identification of genes potentially involved in extracellular activities and lignocellulose degradation during composting of agricultural waste.

Authors:  Lunhui Lu; Guangming Zeng; Changzheng Fan; Jiachao Zhang; Anwei Chen; Ming Chen; Min Jiang; Yujie Yuan; Haipeng Wu; Mingyong Lai; Yibin He
Journal:  Appl Environ Microbiol       Date:  2014-03-21       Impact factor: 4.792

2.  Purification, crystallization and preliminary X-ray structure analysis of the laccase from Ganoderma lucidum.

Authors:  Andrey V Lyashenko; Oksana Belova; Azat G Gabdulkhakov; Alexander A Lashkov; Alexandr V Lisov; Alexey A Leontievsky; Al'bert M Mikhailov
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-07-20

3.  A Thermostable Bilirubin-Oxidizing Enzyme from Activated Sludge Isolated by a Metagenomic Approach.

Authors:  Nobutada Kimura; Yoichi Kamagata
Journal:  Microbes Environ       Date:  2016-11-23       Impact factor: 2.912

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.