Literature DB >> 19255437

Bowl-shaped oligomeric structures on membranes as DegP's new functional forms in protein quality control.

Qing-Tao Shen1, Xiao-Chen Bai, Lei-Fu Chang, Yi Wu, Hong-Wei Wang, Sen-Fang Sui.   

Abstract

In the periplasm of Escherichia coli, DegP (also known as HtrA), which has both chaperone-like and proteolytic activities, prevents the accumulation of toxic misfolded and unfolded polypeptides. In solution, upon binding to denatured proteins, DegP forms large cage-like structures. Here, we show that DegP forms a range of bowl-shaped structures, independent of substrate proteins, each with a 4-, 5-, or 6-fold symmetry and all with a DegP trimer as the structural unit, on lipid membranes. These membrane-bound DegP assemblies have the capacity to recruit and process substrates in the bowl chamber, and they exhibit higher proteolytic and lower chaperone-like activities than DegP in solution. Our findings imply that DegP might regulate its dual roles during protein quality control, depending on its assembly state in the narrow bacterial envelope.

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Year:  2009        PMID: 19255437      PMCID: PMC2660739          DOI: 10.1073/pnas.0811780106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

Review 1.  Posttranslational quality control: folding, refolding, and degrading proteins.

Authors:  S Wickner; M R Maurizi; S Gottesman
Journal:  Science       Date:  1999-12-03       Impact factor: 47.728

2.  Overexpression of protease-deficient DegP(S210A) rescues the lethal phenotype of Escherichia coli OmpF assembly mutants in a degP background.

Authors:  R Misra; M CastilloKeller; M Deng
Journal:  J Bacteriol       Date:  2000-09       Impact factor: 3.490

3.  Crystal structure of DegP (HtrA) reveals a new protease-chaperone machine.

Authors:  Tobias Krojer; Marta Garrido-Franco; Robert Huber; Michael Ehrmann; Tim Clausen
Journal:  Nature       Date:  2002-03-28       Impact factor: 49.962

4.  Protease-deficient DegP suppresses lethal effects of a mutant OmpC protein by its capture.

Authors:  Maria CastilloKeller; Rajeev Misra
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

5.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

6.  Characterization of degP, a gene required for proteolysis in the cell envelope and essential for growth of Escherichia coli at high temperature.

Authors:  K L Strauch; K Johnson; J Beckwith
Journal:  J Bacteriol       Date:  1989-05       Impact factor: 3.490

7.  An Escherichia coli mutation preventing degradation of abnormal periplasmic proteins.

Authors:  K L Strauch; J Beckwith
Journal:  Proc Natl Acad Sci U S A       Date:  1988-03       Impact factor: 11.205

8.  Ring-like pore structures of SecA: implication for bacterial protein-conducting channels.

Authors:  Hong-Wei Wang; Yong Chen; Hsiuchin Yang; Xianchuan Chen; Ming-Xing Duan; Phang C Tai; Sen-Fang Sui
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-17       Impact factor: 11.205

9.  Activation of DegP chaperone-protease via formation of large cage-like oligomers upon binding to substrate proteins.

Authors:  Jiansen Jiang; Xuefeng Zhang; Yong Chen; Yi Wu; Z Hong Zhou; Zengyi Chang; Sen-Fang Sui
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-12       Impact factor: 11.205

10.  The N-terminal region of HtrA heat shock protease from Escherichia coli is essential for stabilization of HtrA primary structure and maintaining of its oligomeric structure.

Authors:  Joanna Skórko-Glonek; Dorota Zurawa; Fabio Tanfani; Andrea Scirè; Alicja Wawrzynów; Joanna Narkiewicz; Enrico Bertoli; Barbara Lipińska
Journal:  Biochim Biophys Acta       Date:  2003-07-30
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  33 in total

1.  The crystal structure of Mycobacterium tuberculosis high-temperature requirement A protein reveals an autoregulatory mechanism.

Authors:  Arvind Kumar Gupta; Debashree Behera; Balasubramanian Gopal
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-11-29       Impact factor: 1.056

2.  Cage assembly of DegP protease is not required for substrate-dependent regulation of proteolytic activity or high-temperature cell survival.

Authors:  Seokhee Kim; Robert T Sauer
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-23       Impact factor: 11.205

Review 3.  The bacterial cell envelope.

Authors:  Thomas J Silhavy; Daniel Kahne; Suzanne Walker
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-04-14       Impact factor: 10.005

4.  HtrA proteases have a conserved activation mechanism that can be triggered by distinct molecular cues.

Authors:  Tobias Krojer; Justyna Sawa; Robert Huber; Tim Clausen
Journal:  Nat Struct Mol Biol       Date:  2010-06-27       Impact factor: 15.369

5.  Determinants of structural and functional plasticity of a widely conserved protease chaperone complex.

Authors:  Melisa Merdanovic; Nicolette Mamant; Michael Meltzer; Simon Poepsel; Alexandra Auckenthaler; Rie Melgaard; Patrick Hauske; Luitgard Nagel-Steger; Anthony R Clarke; Markus Kaiser; Robert Huber; Michael Ehrmann
Journal:  Nat Struct Mol Biol       Date:  2010-06-27       Impact factor: 15.369

6.  The unique trimeric assembly of the virulence factor HtrA from Helicobacter pylori occurs via N-terminal domain swapping.

Authors:  Zhemin Zhang; Qi Huang; Xuan Tao; Guobing Song; Peng Zheng; Hongyan Li; Hongzhe Sun; Wei Xia
Journal:  J Biol Chem       Date:  2019-04-01       Impact factor: 5.157

Review 7.  Escherichia coli DegP: a structure-driven functional model.

Authors:  Joaquin Ortega; Jack Iwanczyk; Ahmad Jomaa
Journal:  J Bacteriol       Date:  2009-05-22       Impact factor: 3.490

8.  Molecular adaptation of the DegQ protease to exert protein quality control in the bacterial cell envelope.

Authors:  Justyna Sawa; Hélène Malet; Tobias Krojer; Flavia Canellas; Michael Ehrmann; Tim Clausen
Journal:  J Biol Chem       Date:  2011-06-17       Impact factor: 5.157

Review 9.  HTRA proteases: regulated proteolysis in protein quality control.

Authors:  Tim Clausen; Markus Kaiser; Robert Huber; Michael Ehrmann
Journal:  Nat Rev Mol Cell Biol       Date:  2011-02-16       Impact factor: 94.444

10.  Cryo-EM structure of Nma111p, a unique HtrA protease composed of two protease domains and four PDZ domains.

Authors:  Li Zhang; Xiaojing Wang; Fenghui Fan; Hong-Wei Wang; Jiawei Wang; Xueming Li; Sen-Fang Sui
Journal:  Cell Res       Date:  2017-01-13       Impact factor: 25.617

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