Literature DB >> 19255366

Excision of Helitron transposons in maize.

Yubin Li1, Hugo K Dooner.   

Abstract

Helitrons are novel transposons discovered by bioinformatic analysis of eukaryotic genome sequences. They are believed to move by rolling circle (RC) replication because their predicted transposases are homologous to those of bacterial RC transposons. We report here evidence of somatic Helitron excision in maize, an unexpected finding suggesting that Helitrons can exhibit an excisive mode of transposition.

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Year:  2009        PMID： 19255366      PMCID： PMC2674836          DOI： 10.1534/genetics.109.101527

Source DB:  PubMed          Journal:  Genetics        ISSN： 0016-6731            Impact factor:   4.562


  16 in total

1.  Rolling-circle transposons in eukaryotes.

Authors:  V V Kapitonov; J Jurka
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-10       Impact factor: 11.205

2.  The maize genome contains a helitron insertion.

Authors:  Shailesh K Lal; Michael J Giroux; Volker Brendel; C Eduardo Vallejos; L Curtis Hannah
Journal:  Plant Cell       Date:  2003-02       Impact factor: 11.277

3.  Vertebrate helentrons and other novel Helitrons.

Authors:  Russell T M Poulter; Timothy J D Goodwin; Margaret I Butler
Journal:  Gene       Date:  2003-08-14       Impact factor: 3.688

4.  IS91 transposase is related to the rolling-circle-type replication proteins of the pUB110 family of plasmids.

Authors:  M V Mendiola; F de la Cruz
Journal:  Nucleic Acids Res       Date:  1992-07-11       Impact factor: 16.971

5.  The role of barren stalk1 in the architecture of maize.

Authors:  Andrea Gallavotti; Qiong Zhao; Junko Kyozuka; Robert B Meeley; Matthew K Ritter; John F Doebley; M Enrico Pè; Robert J Schmidt
Journal:  Nature       Date:  2004-12-02       Impact factor: 49.962

6.  Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize.

Authors:  Michele Morgante; Stephan Brunner; Giorgio Pea; Kevin Fengler; Andrea Zuccolo; Antoni Rafalski
Journal:  Nat Genet       Date:  2005-07-31       Impact factor: 38.330

7.  Spontaneous mutations caused by a Helitron transposon, Hel-It1, in morning glory, Ipomoea tricolor.

Authors:  Jeong-Doo Choi; Atsushi Hoshino; Kyeung-Il Park; In-Sook Park; Shigeru Iida
Journal:  Plant J       Date:  2007-01-25       Impact factor: 6.417

8.  Gene movement by Helitron transposons contributes to the haplotype variability of maize.

Authors:  Jinsheng Lai; Yubin Li; Joachim Messing; Hugo K Dooner
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-10       Impact factor: 11.205

9.  Massive amplification of rolling-circle transposons in the lineage of the bat Myotis lucifugus.

Authors:  Ellen J Pritham; Cédric Feschotte
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-29       Impact factor: 11.205

10.  Population and evolutionary dynamics of Helitron transposable elements in Arabidopsis thaliana.

Authors:  Jesse D Hollister; Brandon S Gaut
Journal:  Mol Biol Evol       Date:  2007-09-21       Impact factor: 16.240
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  11 in total

1.  A cornucopia of Helitrons shapes the maize genome.

Authors:  Cédric Feschotte; Ellen J Pritham
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-19       Impact factor: 11.205

2.  The polychromatic Helitron landscape of the maize genome.

Authors:  Chunguang Du; Nadezhda Fefelova; Jason Caronna; Limei He; Hugo K Dooner
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-19       Impact factor: 11.205

3.  TED, an autonomous and rare maize transposon of the mutator superfamily with a high gametophytic excision frequency.

Authors:  Yubin Li; Linda Harris; Hugo K Dooner
Journal:  Plant Cell       Date:  2013-09-13       Impact factor: 11.277

4.  Gene capture by Helitron transposons reshuffles the transcriptome of maize.

Authors:  Allison M Barbaglia; Katarina M Klusman; John Higgins; Janine R Shaw; L Curtis Hannah; Shailesh K Lal
Journal:  Genetics       Date:  2011-12-14       Impact factor: 4.562

5.  Structural characterization of helitrons and their stepwise capturing of gene fragments in the maize genome.

Authors:  Yongbin Dong; Xiaomin Lu; Weibin Song; Lei Shi; Mei Zhang; Hainan Zhao; Yinping Jiao; Jinsheng Lai
Journal:  BMC Genomics       Date:  2011-12-17       Impact factor: 3.969

6.  Mobilizing the genome of Lepidoptera through novel sequence gains and end creation by non-autonomous Lep1 Helitrons.

Authors:  Brad S Coates; Richard L Hellmich; David M Grant; Craig A Abel
Journal:  DNA Res       Date:  2011-11-15       Impact factor: 4.458

7.  Differential pre-mRNA Splicing Alters the Transcript Diversity of Helitrons Between the Maize Inbred Lines.

Authors:  Brian T Lynch; Tara L Patrick; Jennifer J Moreno; Amy E Siebert; Katarina M Klusman; Donya N Shodja; L Curtis Hannah; Shailesh K Lal
Journal:  G3 (Bethesda)       Date:  2015-06-12       Impact factor: 3.154

8.  The making of a genomic parasite - the Mothra family sheds light on the evolution of Helitrons in plants.

Authors:  Stefan Roffler; Fabrizio Menardo; Thomas Wicker
Journal:  Mob DNA       Date:  2015-12-17

9.  Highly expressed captured genes and cross-kingdom domains present in Helitrons create novel diversity in Pleurotus ostreatus and other fungi.

Authors:  Raúl Castanera; Gúmer Pérez; Leticia López; Rubén Sancho; Francisco Santoyo; Manuel Alfaro; Toni Gabaldón; Antonio G Pisabarro; José A Oguiza; Lucía Ramírez
Journal:  BMC Genomics       Date:  2014-12-05       Impact factor: 3.969

10.  Somatic transposition and meiotically driven elimination of an active helitron family in Pleurotus ostreatus.

Authors:  Alessandra Borgognone; Raúl Castanera; Elaia Muguerza; Antonio G Pisabarro; Lucía Ramírez
Journal:  DNA Res       Date:  2017-04-01       Impact factor: 4.458
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