Literature DB >> 24038653

TED, an autonomous and rare maize transposon of the mutator superfamily with a high gametophytic excision frequency.

Yubin Li1, Linda Harris, Hugo K Dooner.   

Abstract

Mutator (Mu) elements, one of the most diverse superfamilies of DNA transposons, are found in all eukaryotic kingdoms, but are particularly numerous in plants. Most of the present knowledge on the transposition behavior of this superfamily comes from studies of the maize (Zea mays) Mu elements, whose transposition is mediated by the autonomous Mutator-Don Robertson (MuDR) element. Here, we describe the maize element TED (for Transposon Ellen Dempsey), an autonomous cousin that differs significantly from MuDR. Element excision and reinsertion appear to require both proteins encoded by MuDR, but only the single protein encoded by TED. Germinal excisions, rare with MuDR, are common with TED, but arise in one of the mitotic divisions of the gametophyte, rather than at meiosis. Instead, transposition-deficient elements arise at meiosis, suggesting that the double-strand breaks produced by element excision are repaired differently in mitosis and meiosis. Unlike MuDR, TED is a very low-copy transposon whose number and activity do not undergo dramatic changes upon inbreeding or outcrossing. Like MuDR, TED transposes mostly to unlinked sites and can form circular transposition products. Sequences closer to TED than to MuDR were detected only in the grasses, suggesting a rather recent evolutionary split from a common ancestor.

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Year:  2013        PMID: 24038653      PMCID: PMC3809530          DOI: 10.1105/tpc.113.116517

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  73 in total

1.  Origination of Ds elements from Ac elements in maize: evidence for rare repair synthesis at the site of Ac excision.

Authors:  X Yan; I M Martínez-Férez; S Kavchok; H K Dooner
Journal:  Genetics       Date:  1999-08       Impact factor: 4.562

2.  Identification of an active Mutator-like element (MULE) in rice (Oryza sativa).

Authors:  Dongying Gao
Journal:  Mol Genet Genomics       Date:  2012-01-25       Impact factor: 3.291

3.  Cloning of the Mutator transposable element MuA2, a putative regulator of somatic mutability of the a1-Mum2 allele in maize.

Authors:  M M Qin; D S Robertson; A H Ellingboe
Journal:  Genetics       Date:  1991-11       Impact factor: 4.562

Review 4.  Co-evolution between transposable elements and their hosts: a major factor in genome size evolution?

Authors:  J Arvid Ågren; Stephen I Wright
Journal:  Chromosome Res       Date:  2011-08       Impact factor: 5.239

5.  The Mu transposable elements of maize: evidence for transposition and copy number regulation during development.

Authors:  M Alleman; M Freeling
Journal:  Genetics       Date:  1986-01       Impact factor: 4.562

6.  High throughput DNA sequencing: The new sequencing revolution.

Authors:  Michel Delseny; Bin Han; Yue Ie Hsing
Journal:  Plant Sci       Date:  2010-08-03       Impact factor: 4.729

7.  Unstable mutants of bronze induced by pre-meiotic X-ray treatment in maize.

Authors:  J P Mottinger
Journal:  Theor Appl Genet       Date:  1973-01       Impact factor: 5.699

8.  Pack-MULE transposable elements mediate gene evolution in plants.

Authors:  Ning Jiang; Zhirong Bao; Xiaoyu Zhang; Sean R Eddy; Susan R Wessler
Journal:  Nature       Date:  2004-09-30       Impact factor: 49.962

9.  Identification, characterization and distribution of transposable elements in the flax (Linum usitatissimum L.) genome.

Authors:  Leonardo Galindo González; Michael K Deyholos
Journal:  BMC Genomics       Date:  2012-11-21       Impact factor: 3.969

10.  Genome-wide mutagenesis of Zea mays L. using RescueMu transposons.

Authors:  John Fernandes; Qunfeng Dong; Bret Schneider; Darren J Morrow; Guo-Ling Nan; Volker Brendel; Virginia Walbot
Journal:  Genome Biol       Date:  2004-09-23       Impact factor: 13.583

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  6 in total

1.  Transposition of a rice Mutator-like element in the yeast Saccharomyces cerevisiae.

Authors:  Dongyan Zhao; Ann Ferguson; Ning Jiang
Journal:  Plant Cell       Date:  2015-01-13       Impact factor: 11.277

2.  Spontaneous mutations in maize pollen are frequent in some lines and arise mainly from retrotranspositions and deletions.

Authors:  Hugo K Dooner; Qinghua Wang; Jun T Huang; Yubin Li; Limei He; Wenwei Xiong; Chunguang Du
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-16       Impact factor: 11.205

3.  Functional characterization of the active Mutator-like transposable element, Muta1 from the mosquito Aedes aegypti.

Authors:  Kun Liu; Susan R Wessler
Journal:  Mob DNA       Date:  2017-01-11

4.  Modular assembly of transposable element arrays by microsatellite targeting in the guayule and rice genomes.

Authors:  José A Valdes Franco; Yi Wang; Naxin Huo; Grisel Ponciano; Howard A Colvin; Colleen M McMahan; Yong Q Gu; William R Belknap
Journal:  BMC Genomics       Date:  2018-04-19       Impact factor: 3.969

5.  Cloning of Maize TED Transposon into Escherichia coli Reveals the Polychromatic Sequence Landscape of Refractorily Propagated Plasmids.

Authors:  Chunsheng Cong; Jingsheng Tan; Chuxi Li; Fangyuan Liu; Qian Yu; Li Zhu; Yubin Li
Journal:  Int J Mol Sci       Date:  2022-10-09       Impact factor: 6.208

6.  Nested insertions and accumulation of indels are negatively correlated with abundance of mutator-like transposable elements in maize and rice.

Authors:  Dongyan Zhao; Ning Jiang
Journal:  PLoS One       Date:  2014-01-27       Impact factor: 3.240

  6 in total

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