Literature DB >> 19251690

Hydrolase regulates NAD+ metabolites and modulates cellular redox.

Lei Tong1, Susan Lee, John M Denu.   

Abstract

Although the classical redox functions of co-enzyme NAD(+) are firmly established in metabolism, there are numerous enzymes that catalyze cleavage of NAD(+) to yield free ADP-ribose (ADPr) or related metabolites, whose functions remain largely unknown. Here we show that the Nudix (nucleoside diphosphate linked to another moiety X) hydrolase Ysa1 from Saccharomyces cerevisiae is a major regulator of cellular ADPr and O-acetyl-ADP-ribose (OAADPr). OAADPr is the direct product of NAD(+)-dependent protein deacetylases (sirtuins) and is readily converted to ADPr. Ysa1 cleaves ADPr/OAADPr into ribose phosphate/acetyl-ribose phosphate and AMP. In cells lacking Ysa1 (Deltaysa1), ADPr and OAADPr levels increased approximately 50%, with a corresponding decrease in AMP. Strikingly, Deltaysa1 cells display higher resistance to exogenous reactive oxygen species (ROS) and 40% lower basal levels of endogenous ROS, compared with wild type. The biochemical basis for these differences in ROS-related phenotypes was investigated, and the results provide evidence that increased ADPr/OAADPr levels protect cells via the following two pathways: (i) lower ROS production through inhibition of complex I of the mitochondrial electron transport chain, and (ii) generation of higher levels of NADPH to suppress ROS damage. The latter occurs through diverting glucose into the pentose phosphate pathway by ADPr inhibition of glyceraldehyde-3-phosphate dehydrogenase, a central enzyme of glycolysis.

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Year:  2009        PMID: 19251690      PMCID: PMC2670130          DOI: 10.1074/jbc.M809790200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  67 in total

1.  Accumulation of free ADP-ribose from mitochondria mediates oxidative stress-induced gating of TRPM2 cation channels.

Authors:  Anne-Laure Perraud; Christina L Takanishi; Betty Shen; Shin Kang; Megan K Smith; Carsten Schmitz; Heather M Knowles; Dana Ferraris; Weixing Li; Jie Zhang; Barry L Stoddard; Andrew M Scharenberg
Journal:  J Biol Chem       Date:  2004-11-23       Impact factor: 5.157

2.  Conserved enzymatic production and biological effect of O-acetyl-ADP-ribose by silent information regulator 2-like NAD+-dependent deacetylases.

Authors:  Margie T Borra; Forest J O'Neill; Michael D Jackson; Brett Marshall; Eric Verdin; Kathy R Foltz; John M Denu
Journal:  J Biol Chem       Date:  2002-01-25       Impact factor: 5.157

3.  Genomic expression programs in the response of yeast cells to environmental changes.

Authors:  A P Gasch; P T Spellman; C M Kao; O Carmel-Harel; M B Eisen; G Storz; D Botstein; P O Brown
Journal:  Mol Biol Cell       Date:  2000-12       Impact factor: 4.138

4.  Silent information regulator 2 family of NAD- dependent histone/protein deacetylases generates a unique product, 1-O-acetyl-ADP-ribose.

Authors:  K G Tanner; J Landry; R Sternglanz; J M Denu
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

Review 5.  Regulation of poly(ADP-ribose) metabolism by poly(ADP-ribose) glycohydrolase: where and when?

Authors:  M-E Bonicalzi; J-F Haince; A Droit; G G Poirier
Journal:  Cell Mol Life Sci       Date:  2005-04       Impact factor: 9.261

6.  Generation of reactive oxygen species by the mitochondrial electron transport chain.

Authors:  Yuanbin Liu; Gary Fiskum; David Schubert
Journal:  J Neurochem       Date:  2002-03       Impact factor: 5.372

7.  Functional specificity of shuttling hnRNPs revealed by genome-wide analysis of their RNA binding profiles.

Authors:  Karen Kim Guisbert; Kent Duncan; Hao Li; Christine Guthrie
Journal:  RNA       Date:  2005-02-09       Impact factor: 4.942

8.  Nuclear poly(ADP-ribose) polymerase-1 rapidly triggers mitochondrial dysfunction.

Authors:  Giulia Cipriani; Elena Rapizzi; Alfredo Vannacci; Rosario Rizzuto; Flavio Moroni; Alberto Chiarugi
Journal:  J Biol Chem       Date:  2005-03-04       Impact factor: 5.157

Review 9.  Oxidative stress responses of the yeast Saccharomyces cerevisiae.

Authors:  D J Jamieson
Journal:  Yeast       Date:  1998-12       Impact factor: 3.239

10.  A highly specific phosphatase that acts on ADP-ribose 1''-phosphate, a metabolite of tRNA splicing in Saccharomyces cerevisiae.

Authors:  Neil P Shull; Sherry L Spinelli; Eric M Phizicky
Journal:  Nucleic Acids Res       Date:  2005-01-31       Impact factor: 16.971

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  29 in total

Review 1.  Function and metabolism of sirtuin metabolite O-acetyl-ADP-ribose.

Authors:  Lei Tong; John M Denu
Journal:  Biochim Biophys Acta       Date:  2010-02-20

2.  Hydrolysis of O-acetyl-ADP-ribose isomers by ADP-ribosylhydrolase 3.

Authors:  Atsushi Kasamatsu; Motoyuki Nakao; Brian C Smith; Lindsay R Comstock; Tohru Ono; Jiro Kato; John M Denu; Joel Moss
Journal:  J Biol Chem       Date:  2011-04-17       Impact factor: 5.157

Review 3.  Epigenetic responses to environmental change and their evolutionary implications.

Authors:  Bryan M Turner
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2009-11-27       Impact factor: 6.237

4.  Hydrolase controls cellular NAD, sirtuin, and secondary metabolites.

Authors:  Motoyuki Shimizu; Shunsuke Masuo; Tomoya Fujita; Yuki Doi; Yosuke Kamimura; Naoki Takaya
Journal:  Mol Cell Biol       Date:  2012-07-16       Impact factor: 4.272

5.  Depletion of the Trypanosome Pumilio domain protein PUF2 or of some other essential proteins causes transcriptome changes related to coding region length.

Authors:  Bhaskar Anand Jha; Abeer Fadda; Clementine Merce; Elisha Mugo; Dorothea Droll; Christine Clayton
Journal:  Eukaryot Cell       Date:  2014-03-28

6.  Critical role for NAD glycohydrolase in regulation of erythropoiesis by hematopoietic stem cells through control of intracellular NAD content.

Authors:  Tae-Sik Nam; Kwang-Hyun Park; Asif Iqbal Shawl; Byung-Ju Kim; Myung-Kwan Han; Youngho Kim; Joel Moss; Uh-Hyun Kim
Journal:  J Biol Chem       Date:  2014-04-23       Impact factor: 5.157

7.  Complexes of bacterial nicotinate mononucleotide adenylyltransferase with inhibitors: implication for structure-based drug design and improvement.

Authors:  Nian Huang; Rohit Kolhatkar; Yvonne Eyobo; Leonardo Sorci; Irina Rodionova; Andrei L Osterman; Alexander D Mackerell; Hong Zhang
Journal:  J Med Chem       Date:  2010-07-22       Impact factor: 7.446

8.  Histone Deacetylases with Antagonistic Roles in Saccharomyces cerevisiae Heterochromatin Formation.

Authors:  Deborah M Thurtle-Schmidt; Anne E Dodson; Jasper Rine
Journal:  Genetics       Date:  2016-08-03       Impact factor: 4.562

9.  Structure and function of an ADP-ribose-dependent transcriptional regulator of NAD metabolism.

Authors:  Nian Huang; Jessica De Ingeniis; Luca Galeazzi; Chiara Mancini; Yuri D Korostelev; Alexandra B Rakhmaninova; Mikhail S Gelfand; Dmitry A Rodionov; Nadia Raffaelli; Hong Zhang
Journal:  Structure       Date:  2009-07-15       Impact factor: 5.006

10.  Structures of the first representatives of Pfam family PF06938 (DUF1285) reveal a new fold with repeated structural motifs and possible involvement in signal transduction.

Authors:  Gye Won Han; Constantina Bakolitsa; Mitchell D Miller; Abhinav Kumar; Dennis Carlton; Rafael J Najmanovich; Polat Abdubek; Tamara Astakhova; Herbert L Axelrod; Connie Chen; Hsiu Ju Chiu; Thomas Clayton; Debanu Das; Marc C Deller; Lian Duan; Dustin Ernst; Julie Feuerhelm; Joanna C Grant; Anna Grzechnik; Lukasz Jaroszewski; Kevin K Jin; Hope A Johnson; Heath E Klock; Mark W Knuth; Piotr Kozbial; S Sri Krishna; David Marciano; Daniel McMullan; Andrew T Morse; Edward Nigoghossian; Linda Okach; Ron Reyes; Christopher L Rife; Natasha Sefcovic; Henry J Tien; Christine B Trame; Henry van den Bedem; Dana Weekes; Qingping Xu; Keith O Hodgson; John Wooley; Marc André Elsliger; Ashley M Deacon; Adam Godzik; Scott A Lesley; Ian A Wilson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-03-05
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