Literature DB >> 19248763

Alamethicin in lipid bilayers: combined use of X-ray scattering and MD simulations.

Jianjun Pan1, D Peter Tieleman, John F Nagle, Norbert Kucerka, Stephanie Tristram-Nagle.   

Abstract

We study fully hydrated bilayers of two di-monounsaturated phospholipids diC18:1PC (DOPC) and diC22:1PC with varying amounts of alamethicin (Alm). We combine the use of X-ray diffuse scattering and molecular dynamics simulations to determine the orientation of alamethicin in model lipids. Comparison of the experimental and simulated form factors shows that Alm helices are inserted transmembrane at high humidity and high concentrations, in agreement with earlier results. The X-ray scattering data and the MD simulations agree that membrane thickness changes very little up to 1/10 Alm/DOPC. In contrast, the X-ray data indicate that the thicker diC22:1PC membrane thins with added Alm, a total decrease in thickness of 4 A at 1/10 Alm/diC22:1PC. The different effect of Alm on the thickness changes of the two bilayers is consistent with Alm having a hydrophobic thickness close to the hydrophobic thickness of 27 A for DOPC; Alm is then mismatched with the 7 A thicker diC22:1PC bilayer. The X-ray data indicate that Alm decreases the bending modulus (K(C)) by a factor of approximately 2 in DOPC and a factor of approximately 10 in diC22:1PC membranes (P/L approximately 1/10). The van der Waals and fluctuational interactions between bilayers are also evaluated through determination of the anisotropic B compressibility modulus.

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Year:  2009        PMID: 19248763      PMCID: PMC2693350          DOI: 10.1016/j.bbamem.2009.02.013

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  46 in total

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  38 in total

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4.  Effect of membrane structure on the action of polyenes II: nystatin activity along the phase diagram of ergosterol- and cholesterol-containing POPC membranes.

Authors:  J González-Damián; I Ortega-Blake
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Review 5.  Modeling and simulation of ion channels.

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6.  Alamethicin Supramolecular Organization in Lipid Membranes from 19F Solid-State NMR.

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7.  Structure and water permeability of fully hydrated diphytanoylPC.

Authors:  Stephanie Tristram-Nagle; Dong Joo Kim; Nadia Akhunzada; Norbert Kucerka; John C Mathai; John Katsaras; Mark Zeidel; John F Nagle
Journal:  Chem Phys Lipids       Date:  2010-05-04       Impact factor: 3.329

8.  Scaling and alpha-helix regulation of protein relaxation in a lipid bilayer.

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9.  Effect of ceramide on nonraft proteins.

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