Literature DB >> 19245235

Detection and size analysis of proteins with switchable DNA layers.

Ulrich Rant1, Erika Pringsheim, Wolfgang Kaiser, Kenji Arinaga, Jelena Knezevic, Marc Tornow, Shozo Fujita, Naoki Yokoyama, Gerhard Abstreiter.   

Abstract

We introduce a chip-compatible scheme for the label-free detection of proteins in real-time that is based on the electrically driven conformation switching of DNA oligonucleotides on metal surfaces. The switching behavior is a sensitive indicator for the specific recognition of IgG antibodies and antibody fragments, which can be detected in quantities of less than 10(-18) mol on the sensor surface. Moreover, we show how the dynamics of the induced molecular motion can be monitored by measuring the high-frequency switching response. When proteins bind to the layer, the increase in hydrodynamic drag slows the switching dynamics, which allows us to determine the size of the captured proteins. We demonstrate the identification of different antibody fragments by means of their kinetic fingerprint. The switchDNA method represents a generic approach to simultaneously detect and size target molecules using a single analytical platform.

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Year:  2009        PMID: 19245235     DOI: 10.1021/nl8026789

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  7 in total

1.  Biophysical Studies of the Binding of Viral RNA with the 80S Ribosome Using switchSENSE.

Authors:  Emma Schenckbecher; Guillaume Bec; Taiichi Sakamoto; Benoit Meyer; Eric Ennifar
Journal:  Methods Mol Biol       Date:  2021

2.  Reagentless biomolecular analysis using a molecular pendulum.

Authors:  Jagotamoy Das; Surath Gomis; Jenise B Chen; Hanie Yousefi; Sharif Ahmed; Alam Mahmud; Wendi Zhou; Edward H Sargent; Shana O Kelley
Journal:  Nat Chem       Date:  2021-03-08       Impact factor: 24.427

3.  Sorting short fragments of single-stranded DNA with an evolving electric double layer.

Authors:  Jiamin Wu; Shuang-Liang Zhao; Lizeng Gao; Jianzhong Wu; Di Gao
Journal:  J Phys Chem B       Date:  2013-02-14       Impact factor: 2.991

4.  An electrochemical sensor for the detection of protein-small molecule interactions directly in serum and other complex matrices.

Authors:  Kevin J Cash; Francesco Ricci; Kevin W Plaxco
Journal:  J Am Chem Soc       Date:  2009-05-27       Impact factor: 15.419

5.  Protein analysis by time-resolved measurements with an electro-switchable DNA chip.

Authors:  Andreas Langer; Paul A Hampel; Wolfgang Kaiser; Jelena Knezevic; Thomas Welte; Valentina Villa; Makiko Maruyama; Matej Svejda; Simone Jähner; Frank Fischer; Ralf Strasser; Ulrich Rant
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  Fabrication of crystalline submicro-to-nano carbon wire for achieving high current density and ultrastable current.

Authors:  Jufeng Deng; Chong Liu; Dian Song; Marc Madou
Journal:  Microsyst Nanoeng       Date:  2022-02-04       Impact factor: 7.127

7.  Designing new strategy for controlling DNA orientation in biosensors.

Authors:  Chao Feng; Hong-ming Ding; Chun-lai Ren; Yu-qiang Ma
Journal:  Sci Rep       Date:  2015-09-24       Impact factor: 4.379

  7 in total

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