Literature DB >> 19243105

The orbital ground state of the azide-substrate complex of human heme oxygenase is an indicator of distal H-bonding: implications for the enzyme mechanism.

Hiroshi Ogura1, John P Evans, Dungeng Peng, James D Satterlee, Paul R Ortiz de Montellano, Gerd N La Mar.   

Abstract

The active site electronic structure of the azide complex of substrate-bound human heme oxygenase 1 (hHO) has been investigated by (1)H NMR spectroscopy to shed light on the orbital/spin ground state as an indicator of the unique distal pocket environment of the enzyme. Two-dimensional (1)H NMR assignments of the substrate and substrate-contact residue signals reveal a pattern of substrate methyl contact shifts that places the lone iron pi-spin in the d(xz) orbital, rather than the d(yz) orbital found in the cyanide complex. Comparison of iron spin relaxivity, magnetic anisotropy, and magnetic susceptibilities argues for a low-spin, (d(xy))(2)(d(yz),d(xz))(3), ground state in both azide and cyanide complexes. The switch from singly occupied d(yz) for the cyanide to d(xz) for the azide complex of hHO is shown to be consistent with the orbital hole determined by the azide pi-plane in the latter complex, which is approximately 90 degrees in-plane rotated from that of the imidazole pi-plane. The induction of the altered orbital ground state in the azide relative to the cyanide hHO complex, as well as the mean low-field bias of methyl hyperfine shifts and their paramagnetic relaxivity relative to those in globins, indicates that azide exerts a stronger ligand field in hHO than in the globins, or that the distal H-bonding to azide is weaker in hHO than in globins. The Asp140 --> Ala hHO mutant that abolishes activity retains the unusual WT azide complex spin/orbital ground state. The relevance of our findings for other HO complexes and the HO mechanism is discussed.

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Year:  2009        PMID: 19243105      PMCID: PMC2676937          DOI: 10.1021/bi802360g

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  52 in total

1.  Crystal structure of human heme oxygenase-1.

Authors:  D J Schuller; A Wilks; P R Ortiz de Montellano; T L Poulos
Journal:  Nat Struct Biol       Date:  1999-09

2.  The heme complex of Hmu O, a bacterial heme degradation enzyme from Corynebacterium diphtheriae. Structure of the catalytic site.

Authors:  G C Chu; T Tomita; F D Sönnichsen; T Yoshida; M Ikeda-Saito
Journal:  J Biol Chem       Date:  1999-08-27       Impact factor: 5.157

Review 3.  Absorption of heme iron.

Authors:  C Uzel; M E Conrad
Journal:  Semin Hematol       Date:  1998-01       Impact factor: 3.851

4.  Heme-heme oxygenase complex. Structure of the catalytic site and its implication for oxygen activation.

Authors:  S Takahashi; J Wang; D L Rousseau; K Ishikawa; T Yoshida; J R Host; M Ikeda-Saito
Journal:  J Biol Chem       Date:  1994-01-14       Impact factor: 5.157

5.  Heme-heme oxygenase complex: structure and properties of the catalytic site from resonance Raman scattering.

Authors:  S Takahashi; J Wang; D L Rousseau; K Ishikawa; T Yoshida; N Takeuchi; M Ikeda-Saito
Journal:  Biochemistry       Date:  1994-05-10       Impact factor: 3.162

6.  Heme oxygenase (HO-1). Evidence for electrophilic oxygen addition to the porphyrin ring in the formation of alpha-meso-hydroxyheme.

Authors:  A Wilks; J Torpey; P R Ortiz de Montellano
Journal:  J Biol Chem       Date:  1994-11-25       Impact factor: 5.157

7.  Proton NMR investigation of substrate-bound heme oxygenase: evidence for electronic and steric contributions to stereoselective heme cleavage.

Authors:  G Hernández; A Wilks; R Paolesse; K M Smith; P R Ortiz de Montellano; G N La Mar
Journal:  Biochemistry       Date:  1994-05-31       Impact factor: 3.162

8.  Rat liver heme oxygenase. High level expression of a truncated soluble form and nature of the meso-hydroxylating species.

Authors:  A Wilks; P R Ortiz de Montellano
Journal:  J Biol Chem       Date:  1993-10-25       Impact factor: 5.157

9.  Biosynthesis of open-chain tetrapyrroles in plants, algae, and cyanobacteria.

Authors:  S I Beale
Journal:  Ciba Found Symp       Date:  1994

10.  1H NMR study of the effect of variable ligand on heme oxygenase electronic and molecular structure.

Authors:  Li-Hua Ma; Yangzhong Liu; Xuhong Zhang; Tadashi Yoshida; Gerd N La Mar
Journal:  J Inorg Biochem       Date:  2008-09-05       Impact factor: 4.155

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  3 in total

1.  Influence of substrate modification and C-terminal truncation on the active site structure of substrate-bound heme oxygenase from Neisseriae meningitidis. A 1H NMR study.

Authors:  Dungeng Peng; James D Satterlee; Li-Hua Ma; Jerry L Dallas; Kevin M Smith; Xuhong Zhang; Michihiko Sato; Gerd N La Mar
Journal:  Biochemistry       Date:  2011-09-21       Impact factor: 3.162

2.  Role of propionates in substrate binding to heme oxygenase from Neisseria meningitidis: a nuclear magnetic resonance study.

Authors:  Dungeng Peng; Li-Hua Ma; Kevin M Smith; Xuhong Zhang; Michihiko Sato; Gerd N La Mar
Journal:  Biochemistry       Date:  2012-08-30       Impact factor: 3.162

3.  Crystallographic and spectroscopic insights into heme degradation by Mycobacterium tuberculosis MhuD.

Authors:  Amanda B Graves; Robert P Morse; Alex Chao; Angelina Iniguez; Celia W Goulding; Matthew D Liptak
Journal:  Inorg Chem       Date:  2014-06-05       Impact factor: 5.165

  3 in total

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