Literature DB >> 19235721

Regulation of the Caenorhabditis elegans posterior Hox gene egl-5 by microRNA and the polycomb-like gene sop-2.

Hongjie Zhang1, Scott W Emmons.   

Abstract

In Caenorhabditis elegans, the domains of Hox gene expression are controlled by the novel global regulatory gene sop-2. We identified a region located 3' of the Hox gene egl-5 that promotes ectopic expression of an egl-5 reporter gene in a sop-2 mutant. SOP-2 could directly block positive regulatory factors acting in this region, or it could block their expression. We identified three possible miRNA binding sites within the egl-5 3' untranslated region (UTR). Cognate microRNAs are expressed in relevant tissues and can block egl-5 expression when expressed from a transgene. Mutation of the putative binding sites in the egl-5 3'UTR resulted in a modest degree of misexpression of a minimal egl-5 reporter gene, suggesting that microRNAs may contribute to the tight restriction of egl-5 expression to particular cell lineages. (c) 2009 Wiley-Liss, Inc.

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Year:  2009        PMID: 19235721      PMCID: PMC3093708          DOI: 10.1002/dvdy.21876

Source DB:  PubMed          Journal:  Dev Dyn        ISSN: 1058-8388            Impact factor:   3.780


  33 in total

1.  PCR fusion-based approach to create reporter gene constructs for expression analysis in transgenic C. elegans.

Authors:  Oliver Hobert
Journal:  Biotechniques       Date:  2002-04       Impact factor: 1.993

2.  Unusual number and genomic organization of Hox genes in the tunicate Ciona intestinalis.

Authors:  Antonietta Spagnuolo; Filomena Ristoratore; Anna Di Gregorio; Francesco Aniello; Margherita Branno; Roberto Di Lauro
Journal:  Gene       Date:  2003-05-08       Impact factor: 3.688

3.  The C. elegans Polycomb gene SOP-2 encodes an RNA binding protein.

Authors:  Hong Zhang; Andrea Christoforou; L Aravind; Scott W Emmons; Sander van den Heuvel; Daniel A Haber
Journal:  Mol Cell       Date:  2004-06-18       Impact factor: 17.970

4.  Hox cluster disintegration with persistent anteroposterior order of expression in Oikopleura dioica.

Authors:  Hee-Chan Seo; Rolf Brudvik Edvardsen; Anne Dorthea Maeland; Marianne Bjordal; Marit Flo Jensen; Anette Hansen; Mette Flaat; Jean Weissenbach; Hans Lehrach; Patrick Wincker; Richard Reinhardt; Daniel Chourrout
Journal:  Nature       Date:  2004-09-02       Impact factor: 49.962

5.  MicroRNA-directed cleavage of HOXB8 mRNA.

Authors:  Soraya Yekta; I-Hung Shih; David P Bartel
Journal:  Science       Date:  2004-04-23       Impact factor: 47.728

6.  Post-embryonic cell lineages of the nematode, Caenorhabditis elegans.

Authors:  J E Sulston; H R Horvitz
Journal:  Dev Biol       Date:  1977-03       Impact factor: 3.582

7.  Global regulation of Hox gene expression in C. elegans by a SAM domain protein.

Authors:  Hong Zhang; Ricardo B R Azevedo; Robyn Lints; Christina Doyle; Yingqi Teng; Daniel Haber; Scott W Emmons
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8.  Axial patterning of C. elegans male sensilla identities by selector genes.

Authors:  R Lints; L Jia; K Kim; C Li; S W Emmons
Journal:  Dev Biol       Date:  2004-05-01       Impact factor: 3.582

Review 9.  MicroRNAs in the Hox network: an apparent link to posterior prevalence.

Authors:  Soraya Yekta; Clifford J Tabin; David P Bartel
Journal:  Nat Rev Genet       Date:  2008-10       Impact factor: 53.242

10.  The genetics of Caenorhabditis elegans.

Authors:  S Brenner
Journal:  Genetics       Date:  1974-05       Impact factor: 4.562

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  6 in total

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2.  EGL-5/ABD-B plays an instructive role in male cell fate determination in the C. elegans somatic gonad.

Authors:  Andrea K Kalis; Mark W Murphy; David Zarkower
Journal:  Dev Biol       Date:  2010-06-08       Impact factor: 3.582

3.  Recent Molecular Genetic Explorations of Caenorhabditis elegans MicroRNAs.

Authors:  Victor Ambros; Gary Ruvkun
Journal:  Genetics       Date:  2018-07       Impact factor: 4.562

4.  The mir-51 family of microRNAs functions in diverse regulatory pathways in Caenorhabditis elegans.

Authors:  John L Brenner; Benedict J Kemp; Allison L Abbott
Journal:  PLoS One       Date:  2012-05-16       Impact factor: 3.240

5.  Dysregulation of Neuronal Gαo Signaling by Graphene Oxide in Nematode Caenorhabditis elegans.

Authors:  Peidang Liu; Huimin Shao; Xuecheng Ding; Ruilong Yang; Qi Rui; Dayong Wang
Journal:  Sci Rep       Date:  2019-04-15       Impact factor: 4.379

6.  Dual repression of endocytic players by ESCC microRNAs and the Polycomb complex regulates mouse embryonic stem cell pluripotency.

Authors:  Ridim Dadasaheb Mote; Gaurang Mahajan; Anup Padmanabhan; Ramaraju Ambati; Deepa Subramanyam
Journal:  Sci Rep       Date:  2017-12-14       Impact factor: 4.379

  6 in total

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