Literature DB >> 19234061

Developmental roles of the histone lysine demethylases.

Amanda Nottke1, Mónica P Colaiácovo, Yang Shi.   

Abstract

Since the discovery of the first histone lysine demethylase in 2004, two protein families with numerous members have been identified that demethylate various histone lysine residues. Initial studies of the histone lysine demethylases focused on their in vitro enzymatic activity but, more recently, model organisms have been used to examine the roles of these enzymes in vivo. Here, we review recent insights into the roles of the histone lysine demethylases in multiple aspects of development across various species, including in germline maintenance and meiosis, in early embryonic development and differentiation, and in hormone receptor-mediated transcriptional regulation.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19234061      PMCID: PMC2692332          DOI: 10.1242/dev.020966

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  96 in total

Review 1.  Histone demethylation by hydroxylation: chemistry in action.

Authors:  Jessica Schneider; Ali Shilatifard
Journal:  ACS Chem Biol       Date:  2006-03-17       Impact factor: 5.100

Review 2.  Dynamic regulation of histone lysine methylation by demethylases.

Authors:  Yang Shi; Johnathan R Whetstine
Journal:  Mol Cell       Date:  2007-01-12       Impact factor: 17.970

Review 3.  Chromatin modifications and their function.

Authors:  Tony Kouzarides
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

Review 4.  The role of chromatin during transcription.

Authors:  Bing Li; Michael Carey; Jerry L Workman
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

Review 5.  Genome regulation by polycomb and trithorax proteins.

Authors:  Bernd Schuettengruber; Daniel Chourrout; Michel Vervoort; Benjamin Leblanc; Giacomo Cavalli
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

6.  Histone methylation-dependent mechanisms impose ligand dependency for gene activation by nuclear receptors.

Authors:  Ivan Garcia-Bassets; Young-Soo Kwon; Francesca Telese; Gratien G Prefontaine; Kasey R Hutt; Christine S Cheng; Bong-Gun Ju; Kenneth A Ohgi; Jianxun Wang; Laure Escoubet-Lozach; David W Rose; Christopher K Glass; Xiang-Dong Fu; Michael G Rosenfeld
Journal:  Cell       Date:  2007-02-09       Impact factor: 41.582

7.  Cooperative demethylation by JMJD2C and LSD1 promotes androgen receptor-dependent gene expression.

Authors:  Melanie Wissmann; Na Yin; Judith M Müller; Holger Greschik; Barna D Fodor; Thomas Jenuwein; Christine Vogler; Robert Schneider; Thomas Günther; Reinhard Buettner; Eric Metzger; Roland Schüle
Journal:  Nat Cell Biol       Date:  2007-02-04       Impact factor: 28.824

8.  Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.

Authors:  Nathaniel D Heintzman; Rhona K Stuart; Gary Hon; Yutao Fu; Christina W Ching; R David Hawkins; Leah O Barrera; Sara Van Calcar; Chunxu Qu; Keith A Ching; Wei Wang; Zhiping Weng; Roland D Green; Gregory E Crawford; Bing Ren
Journal:  Nat Genet       Date:  2007-02-04       Impact factor: 38.330

9.  Yeast Jhd2p is a histone H3 Lys4 trimethyl demethylase.

Authors:  Gaoyang Liang; Robert J Klose; Kathryn E Gardner; Yi Zhang
Journal:  Nat Struct Mol Biol       Date:  2007-02-18       Impact factor: 15.369

10.  Sex-specific expression of the X-linked histone demethylase gene Jarid1c in brain.

Authors:  Jun Xu; Xinxian Deng; Christine M Disteche
Journal:  PLoS One       Date:  2008-07-02       Impact factor: 3.240

View more
  89 in total

Review 1.  Transcription and post-transcriptional regulation of spermatogenesis.

Authors:  Anilkumar Bettegowda; Miles F Wilkinson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-05-27       Impact factor: 6.237

2.  Histone demethylase KDM5A is an integral part of the core Notch-RBP-J repressor complex.

Authors:  Robert Liefke; Franz Oswald; Cristobal Alvarado; Dolores Ferres-Marco; Gerhard Mittler; Patrick Rodriguez; Maria Dominguez; Tilman Borggrefe
Journal:  Genes Dev       Date:  2010-03-15       Impact factor: 11.361

Review 3.  WT1 and kidney progenitor cells.

Authors:  Jordan A Kreidberg
Journal:  Organogenesis       Date:  2010 Apr-Jun       Impact factor: 2.500

Review 4.  Transcriptional regulation of T cell metabolism.

Authors:  Kenneth P Hough; Danielle A Chisolm; Amy S Weinmann
Journal:  Mol Immunol       Date:  2015-08-19       Impact factor: 4.407

5.  Control of neuronal differentiation by sumoylation of BRAF35, a subunit of the LSD1-CoREST histone demethylase complex.

Authors:  María Ceballos-Chávez; Sabrina Rivero; Pablo García-Gutiérrez; Manuel Rodríguez-Paredes; Mario García-Domínguez; Shomi Bhattacharya; José C Reyes
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-08       Impact factor: 11.205

6.  Differential lncRNA expression profiles in brown and white adipose tissues.

Authors:  Jiantao Chen; Xianwei Cui; Chunmei Shi; Ling Chen; Lei Yang; Lingxia Pang; Jun Zhang; Xirong Guo; Jiaqin Wang; Chenbo Ji
Journal:  Mol Genet Genomics       Date:  2014-12-04       Impact factor: 3.291

Review 7.  KDM1 class flavin-dependent protein lysine demethylases.

Authors:  Jonathan M Burg; Jennifer E Link; Brittany S Morgan; Frederick J Heller; Amanda E Hargrove; Dewey G McCafferty
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

Review 8.  Histone methylation: a dynamic mark in health, disease and inheritance.

Authors:  Eric L Greer; Yang Shi
Journal:  Nat Rev Genet       Date:  2012-04-03       Impact factor: 53.242

Review 9.  Role of histone deacetylase 2 in epigenetics and cellular senescence: implications in lung inflammaging and COPD.

Authors:  Hongwei Yao; Irfan Rahman
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2012-07-27       Impact factor: 5.464

Review 10.  Molecular control of HIV-1 postintegration latency: implications for the development of new therapeutic strategies.

Authors:  Laurence Colin; Carine Van Lint
Journal:  Retrovirology       Date:  2009-12-04       Impact factor: 4.602

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.