Literature DB >> 19223470

Identification of a cytoplasmic complex that adds a cap onto 5'-monophosphate RNA.

Yuichi Otsuka1, Nancy L Kedersha, Daniel R Schoenberg.   

Abstract

Endonuclease decay of nonsense-containing beta-globin mRNA in erythroid cells generates 5'-truncated products that were reported previously to have a cap or caplike structure. We confirmed that this 5' modification is indistinguishable from the cap on full-length mRNA, and Western blotting, immunoprecipitation, and active-site labeling identified a population of capping enzymes in the cytoplasm of erythroid and nonerythroid cells. Cytoplasmic capping enzyme sediments in a 140-kDa complex that contains a kinase which, together with capping enzyme, converts 5'-monophosphate RNA into 5'-GpppX RNA. Capping enzyme shows diffuse and punctate staining throughout the cytoplasm, and its staining does not overlap with P bodies or stress granules. Expression of inactive capping enzyme in a form that is restricted to the cytoplasm reduced the ability of cells to recover from oxidative stress, thus supporting a role for capping in the cytoplasm and suggesting that some mRNAs may be stored in an uncapped state.

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Year:  2009        PMID: 19223470      PMCID: PMC2663312          DOI: 10.1128/MCB.01325-08

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  34 in total

1.  Characterization of mRNA endonucleases.

Authors:  D R Schoenberg; K S Cunningham
Journal:  Methods       Date:  1999-01       Impact factor: 3.608

2.  SMG7 acts as a molecular link between mRNA surveillance and mRNA decay.

Authors:  Leonie Unterholzner; Elisa Izaurralde
Journal:  Mol Cell       Date:  2004-11-19       Impact factor: 17.970

Review 3.  Regulation of cap-dependent translation by eIF4E inhibitory proteins.

Authors:  Joel D Richter; Nahum Sonenberg
Journal:  Nature       Date:  2005-02-03       Impact factor: 49.962

4.  mRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain.

Authors:  E J Cho; T Takagi; C R Moore; S Buratowski
Journal:  Genes Dev       Date:  1997-12-15       Impact factor: 11.361

5.  Enzymatic conversion of 5'-phosphate-terminated RNA to 5'-di- and triphosphate-terminated RNA.

Authors:  E Spencer; D Loring; J Hurwitz; G Monroy
Journal:  Proc Natl Acad Sci U S A       Date:  1978-10       Impact factor: 11.205

6.  Mammalian capping enzyme complements mutant Saccharomyces cerevisiae lacking mRNA guanylyltransferase and selectively binds the elongating form of RNA polymerase II.

Authors:  Z Yue; E Maldonado; R Pillutla; H Cho; D Reinberg; A J Shatkin
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-25       Impact factor: 11.205

7.  Relief of microRNA-mediated translational repression in human cells subjected to stress.

Authors:  Suvendra N Bhattacharyya; Regula Habermacher; Ursula Martine; Ellen I Closs; Witold Filipowicz
Journal:  Cell       Date:  2006-06-16       Impact factor: 41.582

8.  The guanylyltransferase domain of mammalian mRNA capping enzyme binds to the phosphorylated carboxyl-terminal domain of RNA polymerase II.

Authors:  C K Ho; V Sriskanda; S McCracken; D Bentley; B Schwer; S Shuman
Journal:  J Biol Chem       Date:  1998-04-17       Impact factor: 5.157

9.  Nonsense codons in human beta-globin mRNA result in the production of mRNA degradation products.

Authors:  S K Lim; C D Sigmund; K W Gross; L E Maquat
Journal:  Mol Cell Biol       Date:  1992-03       Impact factor: 4.272

10.  Human beta-globin mRNAs that harbor a nonsense codon are degraded in murine erythroid tissues to intermediates lacking regions of exon I or exons I and II that have a cap-like structure at the 5' termini.

Authors:  S K Lim; L E Maquat
Journal:  EMBO J       Date:  1992-09       Impact factor: 11.598

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  67 in total

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Authors:  Tim R Mercer; Marcel E Dinger; Cameron P Bracken; Gabriel Kolle; Jan M Szubert; Darren J Korbie; Marjan E Askarian-Amiri; Brooke B Gardiner; Gregory J Goodall; Sean M Grimmond; John S Mattick
Journal:  Genome Res       Date:  2010-11-02       Impact factor: 9.043

2.  Genome-wide analysis of the 5' and 3' ends of vaccinia virus early mRNAs delineates regulatory sequences of annotated and anomalous transcripts.

Authors:  Zhilong Yang; Daniel P Bruno; Craig A Martens; Stephen F Porcella; Bernard Moss
Journal:  J Virol       Date:  2011-04-13       Impact factor: 5.103

Review 3.  Annotating non-coding transcription using functional genomics strategies.

Authors:  Alistair R R Forrest; Rehab F Abdelhamid; Piero Carninci
Journal:  Brief Funct Genomic Proteomic       Date:  2009-11

4.  Potential role for snoRNAs in PKR activation during metabolic stress.

Authors:  Osama A Youssef; Sarah A Safran; Takahisa Nakamura; David A Nix; Gökhan S Hotamisligil; Brenda L Bass
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

5.  mRNA 5' ends targeted by cytoplasmic recapping cluster at CAGE tags and select transcripts are alternatively spliced.

Authors:  Mikaela R Berger; Rolando Alvarado; Daniel L Kiss
Journal:  FEBS Lett       Date:  2019-03-09       Impact factor: 4.124

6.  New class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism.

Authors:  Philipp Kapranov; Fatih Ozsolak; Sang Woo Kim; Sylvain Foissac; Doron Lipson; Chris Hart; Steve Roels; Christelle Borel; Stylianos E Antonarakis; A Paula Monaghan; Bino John; Patrice M Milos
Journal:  Nature       Date:  2010-07-29       Impact factor: 49.962

7.  The messenger RNA decapping and recapping pathway in Trypanosoma.

Authors:  Anna V Ignatochkina; Yuko Takagi; Yancheng Liu; Kyosuke Nagata; C Kiong Ho
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-18       Impact factor: 11.205

Review 8.  RNA dust: where are the genes?

Authors:  Piero Carninci
Journal:  DNA Res       Date:  2010-03-07       Impact factor: 4.458

9.  Identification of a quality-control mechanism for mRNA 5'-end capping.

Authors:  Xinfu Jiao; Song Xiang; Chanseok Oh; Charles E Martin; Liang Tong; Megerditch Kiledjian
Journal:  Nature       Date:  2010-08-29       Impact factor: 49.962

Review 10.  From transcription start site to cell biology.

Authors:  Philipp Kapranov
Journal:  Genome Biol       Date:  2009-04-20       Impact factor: 13.583

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