Literature DB >> 1545796

Nonsense codons in human beta-globin mRNA result in the production of mRNA degradation products.

S K Lim1, C D Sigmund, K W Gross, L E Maquat.   

Abstract

Human beta zero-thalassemic beta-globin genes harboring either a frameshift or a nonsense mutation that results in the premature termination of beta-globin mRNA translation have been previously introduced into the germ line of mice (S.-K. Lim, J.J. Mullins, C.-M. Chen, K. Gross, and L.E. Maquat, EMBO J. 8:2613-2619, 1989). Each transgene produces properly processed albeit abnormally unstable mRNA as well as several smaller RNAs in erythroid cells. These smaller RNAs are detected only in the cytoplasm and, relative to mRNA, are longer-lived and are missing sequences from either exon I or exons I and II. In this communication, we show by using genetics and S1 nuclease transcript mapping that the premature termination of beta-globin mRNA translation is mechanistically required for the abnormal RNA metabolism. We also provide evidence that generation of the smaller RNAs is a cytoplasmic process: the 5' ends of intron 1-containing pre-mRNAs were normal, the rates of removal of introns 1 and 2 were normal, and studies inhibiting RNA synthesis with actinomycin D demonstrated a precursor-product relationship between full-length mRNA and the smaller RNAs. In vivo, about 50% of the full-length species that undergo decay are degraded to the smaller RNAs and the rest are degraded to undetectable products. Exposure of erythroid cells that expressed a normal human beta-globin transgene to either cycloheximide or puromycin did not result in the generation of the smaller RNAs. Therefore, a drug-induced reduction in cellular protein synthesis does not reproduce this aspect of cytoplasmic mRNA metabolism. These data suggest that the premature termination of beta-globin mRNA translation in either exon I or exon II results in the cytoplasmic generation of discrete mRNA degradation products that are missing sequences from exon I or exons I and II. Since these degradation products appear to be the same for all nonsense codons tested, there is no correlation between the position of translation termination and the sites of nucleolytic cleavage.

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Year:  1992        PMID: 1545796      PMCID: PMC369546          DOI: 10.1128/mcb.12.3.1149-1161.1992

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  53 in total

1.  Upstream G gamma-globin and downstream beta-globin sequences required for stage-specific expression in transgenic mice.

Authors:  M Trudel; J Magram; L Bruckner; F Costantini
Journal:  Mol Cell Biol       Date:  1987-11       Impact factor: 4.272

Review 2.  Mechanisms of mRNA decay in bacteria: a perspective.

Authors:  J G Belasco; C F Higgins
Journal:  Gene       Date:  1988-12-10       Impact factor: 3.688

3.  Translation is required for regulation of histone mRNA degradation.

Authors:  R A Graves; N B Pandey; N Chodchoy; W F Marzluff
Journal:  Cell       Date:  1987-02-27       Impact factor: 41.582

4.  5,6-Dichloro-1-beta-D-ribofuranosylbenzimidazole inhibits transcription elongation by RNA polymerase II in vitro.

Authors:  L A Chodosh; A Fire; M Samuels; P A Sharp
Journal:  J Biol Chem       Date:  1989-02-05       Impact factor: 5.157

5.  Stabilization of tubulin mRNA by inhibition of protein synthesis in sea urchin embryos.

Authors:  Z Y Gong; B P Brandhorst
Journal:  Mol Cell Biol       Date:  1988-08       Impact factor: 4.272

6.  Coupling of replication type histone mRNA levels to DNA synthesis requires the stem-loop sequence at the 3' end of the mRNA.

Authors:  B J Levine; N Chodchoy; W F Marzluff; A I Skoultchi
Journal:  Proc Natl Acad Sci U S A       Date:  1987-09       Impact factor: 11.205

7.  A monoclonal antibody against 2,2,7-trimethylguanosine that reacts with intact, class U, small nuclear ribonucleoproteins as well as with 7-methylguanosine-capped RNAs.

Authors:  P Bochnig; R Reuter; P Bringmann; R Lührmann
Journal:  Eur J Biochem       Date:  1987-10-15

8.  Premature translation termination mediates triosephosphate isomerase mRNA degradation.

Authors:  I O Daar; L E Maquat
Journal:  Mol Cell Biol       Date:  1988-02       Impact factor: 4.272

9.  Sequence-independent autoregulation of the adenovirus type 5 E1A transcription unit.

Authors:  P Hearing; T Shenk
Journal:  Mol Cell Biol       Date:  1985-11       Impact factor: 4.272

10.  Erythroid-specific expression of human beta-globin genes in transgenic mice.

Authors:  T M Townes; J B Lingrel; H Y Chen; R L Brinster; R D Palmiter
Journal:  EMBO J       Date:  1985-07       Impact factor: 11.598

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  57 in total

1.  Rapid deadenylation triggered by a nonsense codon precedes decay of the RNA body in a mammalian cytoplasmic nonsense-mediated decay pathway.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Mol Cell Biol       Date:  2003-07       Impact factor: 4.272

2.  An endonuclease activity similar to Xenopus PMR1 catalyzes the degradation of normal and nonsense-containing human beta-globin mRNA in erythroid cells.

Authors:  Kirsten A Bremer; Audrey Stevens; Daniel R Schoenberg
Journal:  RNA       Date:  2003-09       Impact factor: 4.942

3.  The fitness of defective interfering murine coronavirus DI-a and its derivatives is decreased by nonsense and frameshift mutations.

Authors:  R J de Groot; R G van der Most; W J Spaan
Journal:  J Virol       Date:  1992-10       Impact factor: 5.103

4.  Identification of a cytoplasmic complex that adds a cap onto 5'-monophosphate RNA.

Authors:  Yuichi Otsuka; Nancy L Kedersha; Daniel R Schoenberg
Journal:  Mol Cell Biol       Date:  2009-02-17       Impact factor: 4.272

Review 5.  Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae.

Authors:  G Caponigro; R Parker
Journal:  Microbiol Rev       Date:  1996-03

6.  Binary specification of nonsense codons by splicing and cytoplasmic translation.

Authors:  R Thermann; G Neu-Yilik; A Deters; U Frede; K Wehr; C Hagemeier; M W Hentze; A E Kulozik
Journal:  EMBO J       Date:  1998-06-15       Impact factor: 11.598

7.  Defects in RNA splicing and the consequence of shortened translational reading frames.

Authors:  L E Maquat
Journal:  Am J Hum Genet       Date:  1996-08       Impact factor: 11.025

8.  A splicing-dependent regulatory mechanism that detects translation signals.

Authors:  M S Carter; S Li; M F Wilkinson
Journal:  EMBO J       Date:  1996-11-01       Impact factor: 11.598

9.  Mammalian nonsense codons can be cis effectors of nuclear mRNA half-life.

Authors:  P Belgrader; J Cheng; X Zhou; L S Stephenson; L E Maquat
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

10.  Beta -Globin mRNA decay in erythroid cells: UG site-preferred endonucleolytic cleavage that is augmented by a premature termination codon.

Authors:  Audrey Stevens; Yang Wang; Kirsten Bremer; Jing Zhang; Robert Hoepfner; Michael Antoniou; Daniel R Schoenberg; Lynne E Maquat
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-19       Impact factor: 11.205

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