Literature DB >> 19220400

The dddP gene, encoding a novel enzyme that converts dimethylsulfoniopropionate into dimethyl sulfide, is widespread in ocean metagenomes and marine bacteria and also occurs in some Ascomycete fungi.

J D Todd1, A R J Curson, C L Dupont, P Nicholson, A W B Johnston.   

Abstract

The marine alphaproteobacterium Roseovarius nubinhibens ISM can produce the gas dimethyl sulfide (DMS) from dimethylsulfoniopropionate (DMSP), a widespread secondary metabolite that occurs in many phytoplankton. Roseovarius possesses a novel gene, termed dddP, which when cloned, confers on Escherichia coli the ability to produce DMS. The DddP polypeptide is in the large family of M24 metallopeptidases and is wholly different from two other enzymes, DddD and DddL, which were previously shown to generate DMS from dimethylsulfoniopropionate. Close homologues of DddP occur in other alphaproteobacteria and more surprisingly, in some Ascomycete fungi. These were the biotechnologically important Aspergillus oryzae and the plant pathogen, Fusarium graminearum. The dddP gene is abundant in the bacterial metagenomic sequences in the Global Ocean Sampling Expedition. Thus, dddP has several novel features and is widely dispersed, both taxonomically and geographically.

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Year:  2009        PMID: 19220400     DOI: 10.1111/j.1462-2920.2009.01864.x

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  41 in total

1.  Genome sequence of the marine alphaproteobacterium HTCC2150, assigned to the Roseobacter clade.

Authors:  Ilnam Kang; Hyun-Myung Oh; Kevin L Vergin; Stephen J Giovannoni; Jang-Cheon Cho
Journal:  J Bacteriol       Date:  2010-10-01       Impact factor: 3.490

2.  Bacterial flavin-containing monooxygenase is trimethylamine monooxygenase.

Authors:  Yin Chen; Nisha A Patel; Andrew Crombie; James H Scrivens; J Colin Murrell
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-17       Impact factor: 11.205

3.  Changes in dimethylsulfoniopropionate demethylase gene assemblages in response to an induced phytoplankton bloom.

Authors:  Erinn C Howard; Shulei Sun; Christopher R Reisch; Daniela A del Valle; Helmut Bürgmann; Ronald P Kiene; Mary Ann Moran
Journal:  Appl Environ Microbiol       Date:  2010-11-19       Impact factor: 4.792

4.  DddW, a third DMSP lyase in a model Roseobacter marine bacterium, Ruegeria pomeroyi DSS-3.

Authors:  Jonathan D Todd; Mark Kirkwood; Simone Newton-Payne; Andrew W B Johnston
Journal:  ISME J       Date:  2011-06-16       Impact factor: 10.302

5.  Novel pathway for assimilation of dimethylsulphoniopropionate widespread in marine bacteria.

Authors:  Chris R Reisch; Melissa J Stoudemayer; Vanessa A Varaljay; I Jonathan Amster; Mary Ann Moran; William B Whitman
Journal:  Nature       Date:  2011-05-12       Impact factor: 49.962

6.  Survey of Bacterial Phylogenetic Diversity During the Glacier Melting Season in an Arctic Fjord.

Authors:  Dukki Han; Tim Richter-Heitmann; Il-Nam Kim; Eunjung Choy; Ki-Tae Park; Tatsuya Unno; Jungman Kim; Seung-Il Nam
Journal:  Microb Ecol       Date:  2020-10-16       Impact factor: 4.552

7.  Complete genome sequence of Rhodococcus sp. NJ-530, a DMSP-degrading actinobacterium isolated from Antarctic sea ice.

Authors:  Changfeng Qu; Wenyu Wang; Jianjun Dong; Xixi Wang; Xuxu Gao; Honghai Zhang; Zhou Zheng; Hua Yin; Jinlai Miao
Journal:  3 Biotech       Date:  2019-09-18       Impact factor: 2.406

8.  Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK.

Authors:  Ming Peng; Xiu-Lan Chen; Dian Zhang; Xiu-Juan Wang; Ning Wang; Peng Wang; Jonathan D Todd; Yu-Zhong Zhang; Chun-Yang Li
Journal:  Appl Environ Microbiol       Date:  2019-04-04       Impact factor: 4.792

9.  Molecular insight into bacterial cleavage of oceanic dimethylsulfoniopropionate into dimethyl sulfide.

Authors:  Chun-Yang Li; Tian-Di Wei; Sheng-Hui Zhang; Xiu-Lan Chen; Xiang Gao; Peng Wang; Bin-Bin Xie; Hai-Nan Su; Qi-Long Qin; Xi-Ying Zhang; Juan Yu; Hong-Hai Zhang; Bai-Cheng Zhou; Gui-Peng Yang; Yu-Zhong Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-06       Impact factor: 11.205

10.  Metagenomic insights into strategies of carbon conservation and unusual sulfur biogeochemistry in a hypersaline Antarctic lake.

Authors:  Sheree Yau; Federico M Lauro; Timothy J Williams; Matthew Z Demaere; Mark V Brown; John Rich; John Ae Gibson; Ricardo Cavicchioli
Journal:  ISME J       Date:  2013-04-25       Impact factor: 10.302

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