Literature DB >> 19215778

RNA polyadenylation and decay in mitochondria and chloroplasts.

Gadi Schuster1, David Stern.   

Abstract

Mitochondria and chloroplasts were originally acquired by eukaryotic cells through endosymbiotic events and retain their own gene expression machinery. One hallmark of gene regulation in these two organelles is the predominance of posttranscriptional control, which is exerted both at the gene-specific and global levels. This review focuses on their mechanisms of RNA degradation, and therefore mainly on the polyadenylation-stimulated degradation pathway. Overall, mitochondria and chloroplasts have retained the prokaryotic RNA decay system, despite evolution in the number and character of the enzymes involved. However, several significant differences exist, of which the presence of stable poly(A) tails, and the location of PNPase in the intermembrane space in animal mitochondria, are perhaps the most remarkable. The known and predicted proteins taking part in polyadenylation-stimulated degradation pathways are described, both in chloroplasts and four mitochondrial types: plant, yeast, trypanosome, and animal.

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Year:  2009        PMID: 19215778     DOI: 10.1016/S0079-6603(08)00810-6

Source DB:  PubMed          Journal:  Prog Mol Biol Transl Sci        ISSN: 1877-1173            Impact factor:   3.622


  49 in total

Review 1.  Novel endoribonucleases as central players in various pathways of eukaryotic RNA metabolism.

Authors:  Rafal Tomecki; Andrzej Dziembowski
Journal:  RNA       Date:  2010-07-30       Impact factor: 4.942

Review 2.  All things must pass: contrasts and commonalities in eukaryotic and bacterial mRNA decay.

Authors:  Joel G Belasco
Journal:  Nat Rev Mol Cell Biol       Date:  2010-06-03       Impact factor: 94.444

3.  Leaderless mRNAs are circularized in Chlamydomonas reinhardtii mitochondria.

Authors:  A Bruce Cahoon; Ali A Qureshi
Journal:  Curr Genet       Date:  2018-06-01       Impact factor: 3.886

4.  Expression of plastid genes: organelle-specific elaborations on a prokaryotic scaffold.

Authors:  Alice Barkan
Journal:  Plant Physiol       Date:  2011-02-23       Impact factor: 8.340

5.  Characterization of the psbH precursor RNAs reveals a precise endoribonuclease cleavage site in the psbT/psbH intergenic region that is dependent on psbN gene expression.

Authors:  Fabien Chevalier; Mustafa Malik Ghulam; Damien Rondet; Thomas Pfannschmidt; Livia Merendino; Silva Lerbs-Mache
Journal:  Plant Mol Biol       Date:  2015-05-27       Impact factor: 4.076

Review 6.  The interplay of Hfq, poly(A) polymerase I and exoribonucleases at the 3' ends of RNAs resulting from Rho-independent termination: A tentative model.

Authors:  Philippe Régnier; Eliane Hajnsdorf
Journal:  RNA Biol       Date:  2013-02-07       Impact factor: 4.652

7.  High-throughput sequencing of the chloroplast and mitochondrion of Chlamydomonas reinhardtii to generate improved de novo assemblies, analyze expression patterns and transcript speciation, and evaluate diversity among laboratory strains and wild isolates.

Authors:  Sean D Gallaher; Sorel T Fitz-Gibbon; Daniela Strenkert; Samuel O Purvine; Matteo Pellegrini; Sabeeha S Merchant
Journal:  Plant J       Date:  2018-01-07       Impact factor: 6.417

Review 8.  Bacterial/archaeal/organellar polyadenylation.

Authors:  Bijoy K Mohanty; Sidney R Kushner
Journal:  Wiley Interdiscip Rev RNA       Date:  2011 Mar-Apr       Impact factor: 9.957

9.  Organellar and Secretory Ribonucleases: Major Players in Plant RNA Homeostasis.

Authors:  Gustavo C MacIntosh; Benoît Castandet
Journal:  Plant Physiol       Date:  2020-06-08       Impact factor: 8.340

10.  Targeting of the cytosolic poly(A) binding protein PABPC1 to mitochondria causes mitochondrial translation inhibition.

Authors:  Mateusz Wydro; Agnieszka Bobrowicz; Richard J Temperley; Robert N Lightowlers; Zofia M Chrzanowska-Lightowlers
Journal:  Nucleic Acids Res       Date:  2010-02-09       Impact factor: 16.971

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