Literature DB >> 19209811

Tropomyosin exons as models for alternative splicing.

Clare Gooding1, Christopher W J Smith.   

Abstract

Three of the four mammalian tropomyosin (Tm) genes are alternatively spliced, most commonly by mutually exclusive selection from pairs of internal or 3' end exons. Alternative splicing events in the TPM1, 2 and 3 genes have been analysed experimentally in various levels ofdetail. In particular, mutually exclusive exon pairs in the betaTm (TPM2) and alphaTm (TPM1) genes are among the most intensively studied models for striated and smooth muscle specific alternative splicing, respectively. Analysis of these model systems has provided important insights into general mechanisms and strategies of splicing regulation.

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Year:  2008        PMID: 19209811     DOI: 10.1007/978-0-387-85766-4_3

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  23 in total

1.  Tropomyosin variants describe distinct functional subcellular domains in differentiated vascular smooth muscle cells.

Authors:  Cynthia Gallant; Sarah Appel; Philip Graceffa; Paul Leavis; Jim Jung-Ching Lin; Peter W Gunning; Galina Schevzov; Christine Chaponnier; Jon DeGnore; William Lehman; Kathleen G Morgan
Journal:  Am J Physiol Cell Physiol       Date:  2011-02-02       Impact factor: 4.249

2.  Internal and external paralogy in the evolution of tropomyosin genes in metazoans.

Authors:  Manuel Irimia; Ignacio Maeso; Peter W Gunning; Jordi Garcia-Fernàndez; Scott William Roy
Journal:  Mol Biol Evol       Date:  2010-02-10       Impact factor: 16.240

3.  Revisiting the identification of canonical splice isoforms through integration of functional genomics and proteomics evidence.

Authors:  Hong-Dong Li; Rajasree Menon; Gilbert S Omenn; Yuanfang Guan
Journal:  Proteomics       Date:  2014-11-17       Impact factor: 3.984

4.  A bioinformatic and computational study of myosin phosphatase subunit diversity.

Authors:  Rachael P Dippold; Steven A Fisher
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2014-06-04       Impact factor: 3.619

5.  Tra2β protein is required for tissue-specific splicing of a smooth muscle myosin phosphatase targeting subunit alternative exon.

Authors:  Kang Fu; Ylva Mende; Bhupal P Bhetwal; Salah Baker; Brian A Perrino; Brunhilde Wirth; Steven A Fisher
Journal:  J Biol Chem       Date:  2012-03-21       Impact factor: 5.157

6.  Alternative splicing of the Caenorhabditis elegans lev-11 tropomyosin gene is regulated in a tissue-specific manner.

Authors:  Eichi Watabe; Shoichiro Ono; Hidehito Kuroyanagi
Journal:  Cytoskeleton (Hoboken)       Date:  2018-11-15

7.  TRA2β controls Mypt1 exon 24 splicing in the developmental maturation of mouse mesenteric artery smooth muscle.

Authors:  Xiaoxu Zheng; John J Reho; Brunhilde Wirth; Steven A Fisher
Journal:  Am J Physiol Cell Physiol       Date:  2014-11-26       Impact factor: 4.249

8.  Expression map of the human exome in CD34+ cells and blood cells: increased alternative splicing in cell motility and immune response genes.

Authors:  Sylvie Tondeur; Céline Pangault; Tanguy Le Carrour; Yoann Lannay; Rima Benmahdi; Aurélie Cubizolle; Said Assou; Véronique Pantesco; Bernard Klein; Samir Hamamah; Jean-François Schved; Thierry Fest; John De Vos
Journal:  PLoS One       Date:  2010-02-01       Impact factor: 3.240

9.  A developmentally regulated spliced variant of PTBP1 is upregulated in type 1 diabetic hearts.

Authors:  KarryAnne Belanger; Curtis A Nutter; Jin Li; Peng Yu; Muge N Kuyumcu-Martinez
Journal:  Biochem Biophys Res Commun       Date:  2018-12-26       Impact factor: 3.575

10.  Affy exon tissues: exon levels in normal tissues in human, mouse and rat.

Authors:  Andrew A Pohl; Charles W Sugnet; Tyson A Clark; Kayla Smith; Pauline A Fujita; Melissa S Cline
Journal:  Bioinformatics       Date:  2009-07-01       Impact factor: 6.937

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