Literature DB >> 19206482

Noise and bandwidth of current recordings from submicrometer pores and nanopores.

Jeffrey D Uram1, Kevin Ke, Michael Mayer.   

Abstract

Nanopores and submicrometer pores have recently been explored for applications ranging from detection of single molecules, assemblies of nanoparticles, nucleic acids, occurrence of chemical reactions, and unfolding of proteins. Most of these applications rely on monitoring electrical current through these pores, hence the noise and signal bandwidth of these current recordings are critical for achieving accurate and sensitive measurements. In this report, we present a detailed theoretical and experimental study on the noise and signal bandwidth of current recordings from glass and polyethylene terephthalate (PET) membranes that contain a single submicrometer pore or nanopore. We examined the theoretical signal bandwidth of two different pore geometries, and we measured the signal bandwidth of the electronics used to record the ionic current. We also investigated the theoretical noise generated by the substrate material, the pore, and the electronics used to record the current. Employing a combination of theory and experimental results, we were able to predict the noise in current traces recorded from glass and PET pores with no applied voltage with an error of less than 12% in a range of signal bandwidths from 1 to 40 kHz. In approximately half of all experiments, application of a voltage did not significantly increase the noise. In the other half of experiments, however, application of a voltage resulted in an additional source of noise. For these pores, predictions of the noise were usually still accurate within 35% error at signal bandwidths of at least 10 kHz. The power spectra of this extra noise suggested a 1/f(alpha) origin with best fits to the power spectrum for alpha = 0.4-0.8. This work provides the theoretical background and experimental data for understanding the bandwidth requirements and the main sources of noise in current recordings; it will be useful for minimizing noise and achieving accurate recordings.

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Year:  2008        PMID: 19206482     DOI: 10.1021/nn700322m

Source DB:  PubMed          Journal:  ACS Nano        ISSN: 1936-0851            Impact factor:   15.881


  31 in total

1.  Close encounters: integrating nanopores and CMOS amplifiers for single-molecule detection.

Authors:  John S Oliver; Valentin Dimitrov
Journal:  Nat Methods       Date:  2012-04-27       Impact factor: 28.547

2.  Single-particle characterization of Aβ oligomers in solution.

Authors:  Erik C Yusko; Panchika Prangkio; David Sept; Ryan C Rollings; Jiali Li; Michael Mayer
Journal:  ACS Nano       Date:  2012-06-21       Impact factor: 15.881

Review 3.  Applications of biological pores in nanomedicine, sensing, and nanoelectronics.

Authors:  Sheereen Majd; Erik C Yusko; Yazan N Billeh; Michael X Macrae; Jerry Yang; Michael Mayer
Journal:  Curr Opin Biotechnol       Date:  2010-06-18       Impact factor: 9.740

Review 4.  Challenges in DNA motion control and sequence readout using nanopore devices.

Authors:  Spencer Carson; Meni Wanunu
Journal:  Nanotechnology       Date:  2015-02-02       Impact factor: 3.874

5.  Ultrafast laser fabrication of submicrometer pores in borosilicate glass.

Authors:  Ran An; Jeffrey D Uram; Erik C Yusko; Kevin Ke; Michael Mayer; Alan J Hunt
Journal:  Opt Lett       Date:  2008-05-15       Impact factor: 3.776

6.  Single-molecule bonds characterized by solid-state nanopore force spectroscopy.

Authors:  Vincent Tabard-Cossa; Matthew Wiggin; Dhruti Trivedi; Nahid N Jetha; Jason R Dwyer; Andre Marziali
Journal:  ACS Nano       Date:  2009-10-27       Impact factor: 15.881

7.  Real-time shape approximation and fingerprinting of single proteins using a nanopore.

Authors:  Erik C Yusko; Brandon R Bruhn; Olivia M Eggenberger; Jared Houghtaling; Ryan C Rollings; Nathan C Walsh; Santoshi Nandivada; Mariya Pindrus; Adam R Hall; David Sept; Jiali Li; Devendra S Kalonia; Michael Mayer
Journal:  Nat Nanotechnol       Date:  2016-12-19       Impact factor: 39.213

8.  Dual-pore glass chips for cell-attached single-channel recordings.

Authors:  Brandon R Bruhn; Haiyan Liu; Stefan Schuhladen; Alan J Hunt; Aghapi Mordovanakis; Michael Mayer
Journal:  Lab Chip       Date:  2014-07-21       Impact factor: 6.799

9.  Water Mediates Recognition of DNA Sequence via Ionic Current Blockade in a Biological Nanopore.

Authors:  Swati Bhattacharya; Jejoong Yoo; Aleksei Aksimentiev
Journal:  ACS Nano       Date:  2016-04-15       Impact factor: 15.881

10.  Advances in Resistive Pulse Sensors: Devices bridging the void between molecular and microscopic detection.

Authors:  Darby Kozak; Will Anderson; Robert Vogel; Matt Trau
Journal:  Nano Today       Date:  2011-10-01       Impact factor: 20.722

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