Literature DB >> 19204095

Using a commercial DiversiLab semiautomated repetitive sequence-based PCR typing technique for identification of Escherichia coli clone ST131 producing CTX-M-15.

Johann D D Pitout1, Lorraine Campbell, Deirdre L Church, Pauline W Wang, David S Guttman, Daniel B Gregson.   

Abstract

A study was designed to evaluate the ability of the DiversiLab fingerprinting kit, a type of repetitive element PCR (rep-PCR), to identify Escherichia coli clone ST131 producing beta-lactamase CTX-M-15. A set of 53 nonduplicate isolates of extended-spectrum beta-lactamase-producing E. coli underwent rep-PCR, pulsed-field gel electrophoresis, and multilocus sequence typing. The DiversiLab system successfully identified E. coli clone ST131 producing CTX-M-15 and provides a simple standardized typing protocol for monitoring the spread of this clone.

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Year:  2009        PMID: 19204095      PMCID: PMC2668328          DOI: 10.1128/JCM.02265-08

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  12 in total

1.  Microbial DNA typing by automated repetitive-sequence-based PCR.

Authors:  Mimi Healy; Joe Huong; Traci Bittner; Maricel Lising; Stacie Frye; Sabeen Raza; Robert Schrock; Janet Manry; Alex Renwick; Robert Nieto; Charles Woods; James Versalovic; James R Lupski
Journal:  J Clin Microbiol       Date:  2005-01       Impact factor: 5.948

2.  Establishment of a universal size standard strain for use with the PulseNet standardized pulsed-field gel electrophoresis protocols: converting the national databases to the new size standard.

Authors:  Susan B Hunter; Paul Vauterin; Mary Ann Lambert-Fair; M Susan Van Duyne; Kristy Kubota; Lewis Graves; Donna Wrigley; Timothy Barrett; Efrain Ribot
Journal:  J Clin Microbiol       Date:  2005-03       Impact factor: 5.948

Review 3.  Multilocus sequence typing of bacteria.

Authors:  Martin C J Maiden
Journal:  Annu Rev Microbiol       Date:  2006       Impact factor: 15.500

Review 4.  Rapid detection and identification of bacterial pathogens using novel molecular technologies: infection control and beyond.

Authors:  Fred C Tenover
Journal:  Clin Infect Dis       Date:  2006-12-29       Impact factor: 9.079

Review 5.  Extended-spectrum beta-lactamase-producing Enterobacteriaceae: an emerging public-health concern.

Authors:  Johann D D Pitout; Kevin B Laupland
Journal:  Lancet Infect Dis       Date:  2008-03       Impact factor: 25.071

Review 6.  Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing.

Authors:  F C Tenover; R D Arbeit; R V Goering; P A Mickelsen; B E Murray; D H Persing; B Swaminathan
Journal:  J Clin Microbiol       Date:  1995-09       Impact factor: 5.948

7.  Turkey: a further country concerned by community-acquired Escherichia coli clone O25-ST131 producing CTX-M-15.

Authors:  Zeki Yumuk; Gokhan Afacan; Marie-Hélène Nicolas-Chanoine; Albert Sotto; Jean-Philippe Lavigne
Journal:  J Antimicrob Chemother       Date:  2008-05-02       Impact factor: 5.790

8.  Intercontinental emergence of Escherichia coli clone O25:H4-ST131 producing CTX-M-15.

Authors:  Marie-Hélène Nicolas-Chanoine; Jorge Blanco; Véronique Leflon-Guibout; Raphael Demarty; Maria Pilar Alonso; Maria Manuela Caniça; Yeon-Joon Park; Jean-Philippe Lavigne; Johann Pitout; James R Johnson
Journal:  J Antimicrob Chemother       Date:  2007-12-11       Impact factor: 5.790

9.  UK epidemic Escherichia coli strains A-E, with CTX-M-15 beta-lactamase, all belong to the international O25:H4-ST131 clone.

Authors:  Siu Ha Lau; Mary E Kaufmann; David M Livermore; Neil Woodford; Geraldine A Willshaw; Tom Cheasty; Katie Stamper; Suganya Reddy; John Cheesbrough; Frederick J Bolton; Andrew J Fox; Mathew Upton
Journal:  J Antimicrob Chemother       Date:  2008-09-08       Impact factor: 5.790

10.  Dissemination of clonally related Escherichia coli strains expressing extended-spectrum beta-lactamase CTX-M-15.

Authors:  Teresa M Coque; Angela Novais; Alessandra Carattoli; Laurent Poirel; Johann Pitout; Luísa Peixe; Fernando Baquero; Rafael Cantón; Patrice Nordmann
Journal:  Emerg Infect Dis       Date:  2008-02       Impact factor: 6.883

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  28 in total

1.  Controlled performance evaluation of the DiversiLab repetitive-sequence-based genotyping system for typing multidrug-resistant health care-associated bacterial pathogens.

Authors:  Ariane Deplano; Olivier Denis; Hector Rodriguez-Villalobos; Raf De Ryck; Marc J Struelens; Marie Hallin
Journal:  J Clin Microbiol       Date:  2011-08-03       Impact factor: 5.948

2.  Infections caused by fluoroquinolone-resistant Escherichia coli following transrectal ultrasound-guided biopsy of the prostate.

Authors:  Nuntra Suwantarat; Susan D Rudin; Steven H Marshall; Andrea M Hujer; Federico Perez; Kristine M Hujer; T Nicholas J Domitrovic; Donald M Dumford; Curtis J Donskey; Robert A Bonomo
Journal:  J Glob Antimicrob Resist       Date:  2014-06-01       Impact factor: 4.035

3.  Clustering of clinical and environmental Escherichia coli O104 isolates using the DiversiLab™ repetitive sequence-based PCR system.

Authors:  N M Herbold; L M Clotilde; K M Anderson; J Kase; G L Hartman; S Himathongkham; A Lin; C R Lauzon
Journal:  Curr Microbiol       Date:  2014-12-02       Impact factor: 2.188

4.  Prevalence and molecular characterization of extended-spectrum-β-lactamase-producing Enterobacteriaceae in a pediatric patient population.

Authors:  Lakshmi Chandramohan; Paula A Revell
Journal:  Antimicrob Agents Chemother       Date:  2012-06-25       Impact factor: 5.191

5.  Molecular epidemiology of NDM-1-producing Enterobacteriaceae and Acinetobacter baumannii isolates from Pakistan.

Authors:  Anna L Sartor; Muhammad W Raza; Shahid A Abbasi; Kathryn M Day; John D Perry; David L Paterson; Hanna E Sidjabat
Journal:  Antimicrob Agents Chemother       Date:  2014-06-30       Impact factor: 5.191

Review 6.  The role of epidemic resistance plasmids and international high-risk clones in the spread of multidrug-resistant Enterobacteriaceae.

Authors:  Amy J Mathers; Gisele Peirano; Johann D D Pitout
Journal:  Clin Microbiol Rev       Date:  2015-07       Impact factor: 26.132

7.  Comparative evaluation of an automated repetitive-sequence-based PCR instrument versus pulsed-field gel electrophoresis in the setting of a Serratia marcescens nosocomial infection outbreak.

Authors:  Marco Ligozzi; Roberta Fontana; Marco Aldegheri; Giovanna Scalet; Giuliana Lo Cascio
Journal:  J Clin Microbiol       Date:  2010-03-17       Impact factor: 5.948

8.  Community-onset Escherichia coli infection resistant to expanded-spectrum cephalosporins in low-prevalence countries.

Authors:  Benjamin A Rogers; Paul R Ingram; Naomi Runnegar; Matthew C Pitman; Joshua T Freeman; Eugene Athan; Sally M Havers; Hanna E Sidjabat; Mark Jones; Earleen Gunning; Mary De Almeida; Kaylene Styles; David L Paterson
Journal:  Antimicrob Agents Chemother       Date:  2014-01-27       Impact factor: 5.191

9.  Recent changes in the epidemiology and management of extended-spectrum β-lactamase-producing Enterobacteriaceae.

Authors:  Johann Dd Pitout
Journal:  F1000 Med Rep       Date:  2009-11-16

10.  Molecular characteristics of extended-spectrum-beta-lactamase-producing Escherichia coli isolates causing bacteremia in the Calgary Health Region from 2000 to 2007: emergence of clone ST131 as a cause of community-acquired infections.

Authors:  Johann D D Pitout; Daniel B Gregson; Lorraine Campbell; Kevin B Laupland
Journal:  Antimicrob Agents Chemother       Date:  2009-04-20       Impact factor: 5.191

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